Aliases for GBP1P1 Gene

Aliases for GBP1P1 Gene

  • Guanylate Binding Protein 1 Pseudogene 1 2 3 5
  • Guanylate Binding Protein 1, Interferon-Inducible Pseudogene 1 2 3
  • Interferon-Induced Guanylate-Binding Protein 1 Pseudogene 3
  • GBP1P1 5

External Ids for GBP1P1 Gene

Previous GeneCards Identifiers for GBP1P1 Gene

  • GC01P089874

Summaries for GBP1P1 Gene

GeneCards Summary for GBP1P1 Gene

GBP1P1 (Guanylate Binding Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for GBP1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GBP1P1 Gene

Genomics for GBP1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GBP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J089407 Promoter 0.6 Ensembl 266.1 +0.5 521 2 CEBPB RXRA ATF4 SP1 ATF3 GBP1P1 LRRC8B piR-33432-024 GBP6
GH01J089428 Enhancer 0.5 Ensembl 14.9 +21.4 21435 1.8 BCL11A ZNF316 BMI1 SPI1 MTA2 IKZF2 RUNX3 ARNT piR-40823-002 GBP1P1 GBP6 GBP5 GBP7 HSALNG0005059 piR-33432-024 LRRC8B ENSG00000286548
GH01J089405 Enhancer 0.3 Ensembl 15.2 -2.4 -2378 0.2 ZNF24 CTCF lnc-GBP5-7 piR-56883-004 GBP1P1 GBP7 GBP6 LRRC8B
GH01J089537 Enhancer 1 ENCODE dbSUPER 4.2 +130.9 130890 2.3 IKZF1 ARNT ZNF395 NBN TAL1 MYNN ZNF316 ADNP FOSL1 HLTF LRRC8B GBP1P1 lnc-GBP5-8 lnc-LRRC8C-4 HSALNG0005068 ENSG00000288629
GH01J089421 Enhancer 0.2 FANTOM5 0.4 +14.4 14414 0.4 GBP5 GBP4 GBP2 GBP1 GBP7 LRRC8C LRRC8B GBP3 piR-33432-024 piR-40823-002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GBP1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GBP1P1 Gene

Latest Assembly
chr1:89,407,679-89,426,243
(GRCh38/hg38)
Size:
18,565 bases
Orientation:
Plus strand

Previous Assembly
chr1:89,873,238-89,890,493
(GRCh37/hg19 by Entrez Gene)
Size:
17,256 bases
Orientation:
Plus strand

chr1:89,873,238-89,891,802
(GRCh37/hg19 by Ensembl)
Size:
18,565 bases
Orientation:
Plus strand

Genomic View for GBP1P1 Gene

Genes around GBP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GBP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GBP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GBP1P1 Gene

Proteins for GBP1P1 Gene

Post-translational modifications for GBP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GBP1P1 Gene

Domains & Families for GBP1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GBP1P1 Gene

Function for GBP1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GBP1P1 Gene

Localization for GBP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GBP1P1 Gene

Pathways & Interactions for GBP1P1 Gene

PathCards logo

SuperPathways for GBP1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GBP1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GBP1P1 Gene

Drugs & Compounds for GBP1P1 Gene

No Compound Related Data Available

Transcripts for GBP1P1 Gene

mRNA/cDNA for GBP1P1 Gene

1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GBP1P1 Gene

No ASD Table

Relevant External Links for GBP1P1 Gene

GeneLoc Exon Structure for
GBP1P1

Expression for GBP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GBP1P1 Gene

mRNA differential expression in normal tissues according to GTEx for GBP1P1 Gene

This gene is overexpressed in Esophagus - Mucosa (x6.5).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for GBP1P1

SOURCE GeneReport for Unigene cluster for GBP1P1 Gene:

Hs.661968
genes like me logo Genes that share expression patterns with GBP1P1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GBP1P1 Gene

Orthologs for GBP1P1 Gene

Evolution for GBP1P1 Gene

ENSEMBL:
Gene Tree for GBP1P1 (if available)
TreeFam:
Gene Tree for GBP1P1 (if available)

No data available for Orthologs for GBP1P1 Gene

Paralogs for GBP1P1 Gene

No data available for Paralogs for GBP1P1 Gene

Variants for GBP1P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for GBP1P1 Gene

Variant ID Type Subtype PubMed ID
esv3586763 CNV gain 21293372
esv3586765 CNV gain 21293372
nsv946062 CNV duplication 23825009

Additional Variant Information for GBP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GBP1P1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for GBP1P1 Gene

Disorders for GBP1P1 Gene

Additional Disease Information for GBP1P1

No disorders were found for GBP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GBP1P1 Gene

Publications for GBP1P1 Gene

No publications were found for GBP1P1 Gene.

Products for GBP1P1 Gene

Sources for GBP1P1 Gene