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Aliases for GBP1P1 Gene

Aliases for GBP1P1 Gene

  • Guanylate Binding Protein 1 Pseudogene 1 2 3 5
  • Guanylate Binding Protein 1, Interferon-Inducible Pseudogene 1 2 3
  • Interferon-Induced Guanylate-Binding Protein 1 Pseudogene 3

External Ids for GBP1P1 Gene

Previous GeneCards Identifiers for GBP1P1 Gene

  • GC01P089874

Summaries for GBP1P1 Gene

GeneCards Summary for GBP1P1 Gene

GBP1P1 (Guanylate Binding Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for GBP1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GBP1P1 Gene

Genomics for GBP1P1 Gene

GeneHancer (GH) Regulatory Elements for GBP1P1 Gene

Promoters and enhancers for GBP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J089407 Promoter 0.8 Ensembl 616.1 +0.5 521 2 RXRA SP1 CEBPB ATF3 GBP1P1 LRRC8B PIR33822
GH01J089537 Enhancer 1.4 Ensembl ENCODE dbSUPER 4.2 +135.8 135758 14.5 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 ZNF121 GTF2F1 CSDE1 CDC5L BACH1 LRRC8B GBP1P1 GC01M089607
GH01J089405 Enhancer 0.3 Ensembl 15.2 -2.2 -2179 0.6 ZNF24 GBP1P1 GBP7 CAPNS1P1
GH01J089421 Enhancer 0.3 FANTOM5 0.4 +14.4 14414 0.4 GBP5 GBP4 GBP2 GBP1 GBP7 LRRC8C LRRC8B GBP3 PIR33822 GBP1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GBP1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GBP1P1 Gene

Genomic Locations for GBP1P1 Gene
chr1:89,407,679-89,426,243
(GRCh38/hg38)
Size:
18,565 bases
Orientation:
Plus strand
chr1:89,873,238-89,891,802
(GRCh37/hg19)
Size:
18,565 bases
Orientation:
Plus strand

Genomic View for GBP1P1 Gene

Genes around GBP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GBP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GBP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GBP1P1 Gene

Proteins for GBP1P1 Gene

Post-translational modifications for GBP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GBP1P1 Gene

Domains & Families for GBP1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GBP1P1 Gene

Function for GBP1P1 Gene

Phenotypes From GWAS Catalog for GBP1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GBP1P1 Gene

Localization for GBP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GBP1P1 Gene

Pathways & Interactions for GBP1P1 Gene

PathCards logo

SuperPathways for GBP1P1 Gene

No Data Available

Interacting Proteins for GBP1P1 Gene

Gene Ontology (GO) - Biological Process for GBP1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GBP1P1 Gene

Drugs & Compounds for GBP1P1 Gene

No Compound Related Data Available

Transcripts for GBP1P1 Gene

mRNA/cDNA for GBP1P1 Gene

(2) Additional mRNA sequences :
(28) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for GBP1P1 Gene

Guanylate binding protein 1, interferon-inducible pseudogene 1:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GBP1P1 Gene

No ASD Table

Relevant External Links for GBP1P1 Gene

GeneLoc Exon Structure for
GBP1P1
ECgene alternative splicing isoforms for
GBP1P1

Expression for GBP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GBP1P1 Gene

mRNA differential expression in normal tissues according to GTEx for GBP1P1 Gene

This gene is overexpressed in Esophagus - Mucosa (x6.5).

NURSA nuclear receptor signaling pathways regulating expression of GBP1P1 Gene:

GBP1P1

SOURCE GeneReport for Unigene cluster for GBP1P1 Gene:

Hs.661968
genes like me logo Genes that share expression patterns with GBP1P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GBP1P1 Gene

Orthologs for GBP1P1 Gene

Evolution for GBP1P1 Gene

ENSEMBL:
Gene Tree for GBP1P1 (if available)
TreeFam:
Gene Tree for GBP1P1 (if available)

No data available for Orthologs for GBP1P1 Gene

Paralogs for GBP1P1 Gene

No data available for Paralogs for GBP1P1 Gene

Variants for GBP1P1 Gene

Sequence variations from dbSNP and Humsavar for GBP1P1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000011630 -- 89,412,201(+) A/G intron_variant
rs1000111879 -- 89,418,684(+) T/G intron_variant
rs1000181269 -- 89,419,889(+) G/C intron_variant
rs1000390076 -- 89,424,052(+) C/T intron_variant
rs1001292947 -- 89,418,355(+) G/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GBP1P1 Gene

Variant ID Type Subtype PubMed ID
esv3586763 CNV gain 21293372
esv3586765 CNV gain 21293372
nsv946062 CNV duplication 23825009

Additional Variant Information for GBP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GBP1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GBP1P1 Gene

Disorders for GBP1P1 Gene

Additional Disease Information for GBP1P1

No disorders were found for GBP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GBP1P1 Gene

Publications for GBP1P1 Gene

No publications were found for GBP1P1 Gene.

Products for GBP1P1 Gene

Sources for GBP1P1 Gene

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