Aliases for GBAP1 Gene

Aliases for GBAP1 Gene

  • Glucosylceramidase Beta Pseudogene 1 2 3 5
  • Glucosidase, Beta, Acid Pseudogene 1 2 3
  • Glucosidase, Beta; Acid, Pseudogene 2 3
  • D-Glucosyl-N-Acylsphingosine Glucohydrolase 3
  • Glucosylceramidase-Like Protein 3
  • Beta-Glucocerebrosidase 3
  • Acid Beta-Glucosidase 3
  • Imiglucerase 3
  • Alglucerase 3
  • Beta-GC 3
  • GBAP1 5
  • GBAP 3
  • GLUC 3
  • GBA 3
  • GC 3

External Ids for GBAP1 Gene

Previous HGNC Symbols for GBAP1 Gene

  • GBAP

Previous GeneCards Identifiers for GBAP1 Gene

  • GC01M155183
  • GC01M126547

Summaries for GBAP1 Gene

GeneCards Summary for GBAP1 Gene

GBAP1 (Glucosylceramidase Beta Pseudogene 1) is a Pseudogene.

Gene Wiki entry for GBAP1 Gene

Additional gene information for GBAP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GBAP1 Gene

Genomics for GBAP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GBAP1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GBAP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GBAP1 Gene

Genomic Locations for GBAP1 Gene
chr1:155,213,821-155,227,534
(GRCh38/hg38)
Size:
13,714 bases
Orientation:
Minus strand
chr1:155,183,616-155,197,325
(GRCh37/hg19)
Size:
13,710 bases
Orientation:
Minus strand

Genomic View for GBAP1 Gene

Genes around GBAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GBAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GBAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GBAP1 Gene

Proteins for GBAP1 Gene

Post-translational modifications for GBAP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GBAP1 Gene

Domains & Families for GBAP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GBAP1 Gene

Function for GBAP1 Gene

Phenotypes From GWAS Catalog for GBAP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GBAP1 Gene

Localization for GBAP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GBAP1 Gene

Pathways & Interactions for GBAP1 Gene

PathCards logo

SuperPathways for GBAP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GBAP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GBAP1 Gene

Drugs & Compounds for GBAP1 Gene

No Compound Related Data Available

Transcripts for GBAP1 Gene

mRNA/cDNA for GBAP1 Gene

12 NCBI additional mRNA sequence :
8 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GBAP1 Gene

No ASD Table

Relevant External Links for GBAP1 Gene

GeneLoc Exon Structure for
GBAP1

Expression for GBAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GBAP1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for GBAP1

SOURCE GeneReport for Unigene cluster for GBAP1 Gene:

Hs.719930
genes like me logo Genes that share expression patterns with GBAP1: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GBAP1 Gene

Orthologs for GBAP1 Gene

Evolution for GBAP1 Gene

ENSEMBL:
Gene Tree for GBAP1 (if available)
TreeFam:
Gene Tree for GBAP1 (if available)

No data available for Orthologs for GBAP1 Gene

Paralogs for GBAP1 Gene

No data available for Paralogs for GBAP1 Gene

Variants for GBAP1 Gene

Structural Variations from Database of Genomic Variants (DGV) for GBAP1 Gene

Variant ID Type Subtype PubMed ID
dgv107e212 CNV gain 25503493
dgv3n68 CNV loss 17160897
dgv55e214 CNV gain 21293372
esv2421617 CNV duplication 20811451
esv2758971 CNV gain 17122850
esv2763713 CNV gain+loss 21179565
esv2764209 CNV gain+loss 21179565
esv28935 CNV gain 19812545
esv3578198 CNV loss 25503493
esv3587619 CNV loss 21293372
nsv1008748 CNV loss 25217958
nsv1010146 CNV gain 25217958
nsv1011773 CNV gain 25217958
nsv1119727 CNV deletion 24896259
nsv1121784 CNV deletion 24896259
nsv1145373 CNV deletion 24896259
nsv1161687 CNV deletion 26073780
nsv2988 CNV insertion 18451855
nsv436038 CNV insertion 17901297
nsv441717 CNV gain 18776908
nsv464084 CNV loss 19166990
nsv470741 CNV loss 18288195
nsv514011 CNV gain 21397061
nsv516159 CNV gain 19592680
nsv527682 CNV gain 19592680
nsv547961 CNV loss 21841781
nsv547963 CNV loss 21841781
nsv547964 CNV gain+loss 21841781
nsv8458 CNV gain 18304495
nsv8469 CNV gain 18304495
nsv946411 CNV duplication 23825009

Additional Variant Information for GBAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GBAP1

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for GBAP1 Gene

Disorders for GBAP1 Gene

Additional Disease Information for GBAP1

No disorders were found for GBAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GBAP1 Gene

Publications for GBAP1 Gene

  1. A genetic variation in the CpG island of pseudogene GBAP1 promoter is associated with gastric cancer susceptibility. (PMID: 30951202) Ma G … Zhang Z (Cancer 2019) 3
  2. The GBAP1 pseudogene acts as a ceRNA for the glucocerebrosidase gene GBA by sponging miR-22-3p. (PMID: 28983119) Straniero L … Asselta R (Scientific reports 2017) 3
  3. Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations. (PMID: 22797727) Okada Y … Tanaka T (Nature genetics 2012) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

Products for GBAP1 Gene

Sources for GBAP1 Gene