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Aliases for GASAL1 Gene

Subcategory (RNA class) for GASAL1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GASAL1 Gene

  • Growth Arrest Associated LncRNA 1 2 3 5
  • Growth-Arrest Associated LncRNA 1 2
  • GASL1 3

External Ids for GASAL1 Gene

Summaries for GASAL1 Gene

GeneCards Summary for GASAL1 Gene

GASAL1 (Growth Arrest Associated LncRNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GASAL1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GASAL1 Gene

Genomics for GASAL1 Gene

GeneHancer (GH) Regulatory Elements for GASAL1 Gene

Promoters and enhancers for GASAL1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J102859 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.5 +57.8 57780 6.6 MTA3 SP1 ZFX ELF3 MNT NKRF POLR2A MLLT1 ZNF121 GTF2F1 AZIN1-AS1 PIR36968 AZIN1 UBR5 ENSG00000272037 GASAL1 ENSG00000253385
GH08J102803 Promoter/Enhancer 1.9 Ensembl ENCODE dbSUPER 11.4 +2.3 2266 7.6 HDGF MTA3 ZNF652 SP1 ZFX CC2D1A ELF3 CTCF MNT CBFA2T2 UBR5 ENSG00000272037 KLF10 FZD6 SLC25A32 DCAF13 GASAL1 AZIN1 ENSG00000253385
GH08J102812 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 11.2 +8.4 8425 2.2 CC2D1A CTCF CBFA2T2 CEBPG GTF2F1 RELA PPARG CREM EGR1 RAD21 KLF10 UBR5 GASAL1 ENSG00000253385
GH08J102860 Promoter/Enhancer 1.2 Ensembl ENCODE 9.1 +53.6 53584 0.6 ZNF600 ZEB2 ZNF629 CEBPB JUN RCOR1 JUND OSR2 PKNOX1 EP300 GASAL1 ENSG00000253385 AZIN1-AS1 AZIN1
GH08J102823 Enhancer 0.9 Ensembl ENCODE 10.8 +19.1 19115 2.1 ZNF652 POLR2A CREM IKZF1 PKNOX1 IKZF2 DPF2 RUNX3 ELF1 BCL11A KLF10 GASAL1 RNU6-1224P ENSG00000253633 ENSG00000253385
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GASAL1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GASAL1 Gene

Genomic Locations for GASAL1 Gene
chr8:102,805,517-102,809,971
(GRCh38/hg38)
Size:
4,455 bases
Orientation:
Plus strand
chr8:103,817,745-103,822,199
(GRCh37/hg19)
Size:
4,455 bases
Orientation:
Plus strand

Genomic View for GASAL1 Gene

Genes around GASAL1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GASAL1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GASAL1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GASAL1 Gene

Proteins for GASAL1 Gene

Post-translational modifications for GASAL1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GASAL1 Gene

Domains & Families for GASAL1 Gene

Gene Families for GASAL1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with GASAL1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GASAL1 Gene

Function for GASAL1 Gene

Phenotypes From GWAS Catalog for GASAL1 Gene

Phenotypes for GASAL1 Gene

genes like me logo Genes that share phenotypes with GASAL1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GASAL1 Gene

Localization for GASAL1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GASAL1 Gene

Pathways & Interactions for GASAL1 Gene

PathCards logo

SuperPathways for GASAL1 Gene

No Data Available

Interacting Proteins for GASAL1 Gene

Gene Ontology (GO) - Biological Process for GASAL1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GASAL1 Gene

Drugs & Compounds for GASAL1 Gene

No Compound Related Data Available

Transcripts for GASAL1 Gene

mRNA/cDNA for GASAL1 Gene

(11) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for GASAL1 Gene

No ASD Table

Relevant External Links for GASAL1 Gene

GeneLoc Exon Structure for
GASAL1
ECgene alternative splicing isoforms for
GASAL1

Expression for GASAL1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GASAL1 Gene

Orthologs for GASAL1 Gene

Evolution for GASAL1 Gene

ENSEMBL:
Gene Tree for GASAL1 (if available)
TreeFam:
Gene Tree for GASAL1 (if available)

No data available for Orthologs for GASAL1 Gene

Paralogs for GASAL1 Gene

No data available for Paralogs for GASAL1 Gene

Variants for GASAL1 Gene

Sequence variations from dbSNP and Humsavar for GASAL1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000082901 -- 102,808,658(+) T/C intron_variant
rs1001043541 -- 102,809,748(+) C/G/T non_coding_transcript_variant
rs1001221627 -- 102,808,683(+) C/G intron_variant
rs1001254509 -- 102,808,998(+) T/C non_coding_transcript_variant
rs1001265598 -- 102,809,994(+) AGAAAGAGAAAGA/AGAAAGA non_coding_transcript_variant

Additional Variant Information for GASAL1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GASAL1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GASAL1 Gene

Disorders for GASAL1 Gene

Additional Disease Information for GASAL1

No disorders were found for GASAL1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GASAL1 Gene

Publications for GASAL1 Gene

  1. A novel lncRNA, GASL1, inhibits cell proliferation and restricts E2F1 activity. (PMID: 28423601) Gasri-Plotnitsky L … Ginsberg D (Oncotarget 2017) 2 3 58
  2. Expression of a Novel Long Noncoding RNA (lncRNA), GASL1, is Downregulated in Patients with Intracranial Aneurysms and Regulates the Proliferation of Vascular Smooth Muscle Cells In Vitro. (PMID: 30742604) Man H … Bi W (Medical science monitor : international medical journal of experimental and clinical research 2019) 3 58

Products for GASAL1 Gene

Sources for GASAL1 Gene

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