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Aliases for GAS2L1P2 Gene

Aliases for GAS2L1P2 Gene

  • Growth Arrest Specific 2 Like 1 Pseudogene 2 2 3 5

External Ids for GAS2L1P2 Gene

Summaries for GAS2L1P2 Gene

GeneCards Summary for GAS2L1P2 Gene

GAS2L1P2 (Growth Arrest Specific 2 Like 1 Pseudogene 2) is a Pseudogene.

Additional gene information for GAS2L1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAS2L1P2 Gene

Genomics for GAS2L1P2 Gene

GeneHancer (GH) Regulatory Elements for GAS2L1P2 Gene

Promoters and enhancers for GAS2L1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J097081 Enhancer 0.3 Ensembl 600.7 -0.4 -356 1.4 SOX6 GAS2L1P2 VN1R51P
GH09J097083 Enhancer 0.2 Ensembl 600.7 -1.6 -1556 0.2 GAS2L1P2 VN1R51P
GH09J097214 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 6.3 -136.6 -136645 8.8 MZF1 ZNF547 RNF2 ZBTB8A ZBTB33 ZNF600 CTCF ZEB2 CTBP1 ZNF501 VN1R51P ANKRD18CP CCDC180 MFSD14C NCBP1 NUTM2G ZNF782 FAM220CP ENSG00000235494 ENSG00000203279
GH09J097038 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 4.8 +42.9 42899 2.1 SP1 ZNF148 TFE3 TRIM24 POLR2A SP5 CREB1 GMEB1 ZBTB8A PRDM10 CTSV GAS2L1P2 MFSD14C
GH09J097061 Enhancer 1 Ensembl ENCODE 7.2 +19.2 19154 1.7 SP7 CREM IKZF1 FOSL2 CREB1 IKZF2 ZEB2 ZNF639 ZNF629 CTBP1 GAS2L1P2 ANKRD18CP TCEA1P1 PIR34542
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAS2L1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAS2L1P2 Gene

Genomic Locations for GAS2L1P2 Gene
chr9:97,075,671-97,081,945
(GRCh38/hg38)
Size:
6,275 bases
Orientation:
Minus strand
chr9:99,837,953-99,844,227
(GRCh37/hg19)
Size:
6,275 bases
Orientation:
Minus strand

Genomic View for GAS2L1P2 Gene

Genes around GAS2L1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAS2L1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAS2L1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAS2L1P2 Gene

Proteins for GAS2L1P2 Gene

Post-translational modifications for GAS2L1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAS2L1P2 Gene

Domains & Families for GAS2L1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAS2L1P2 Gene

Function for GAS2L1P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAS2L1P2 Gene

Localization for GAS2L1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAS2L1P2 Gene

Pathways & Interactions for GAS2L1P2 Gene

PathCards logo

SuperPathways for GAS2L1P2 Gene

No Data Available

Interacting Proteins for GAS2L1P2 Gene

Gene Ontology (GO) - Biological Process for GAS2L1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAS2L1P2 Gene

Drugs & Compounds for GAS2L1P2 Gene

No Compound Related Data Available

Transcripts for GAS2L1P2 Gene

mRNA/cDNA for GAS2L1P2 Gene

(1) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GAS2L1P2 Gene

No ASD Table

Relevant External Links for GAS2L1P2 Gene

GeneLoc Exon Structure for
GAS2L1P2
ECgene alternative splicing isoforms for
GAS2L1P2

Expression for GAS2L1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of GAS2L1P2 Gene:

GAS2L1P2
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAS2L1P2 Gene

Orthologs for GAS2L1P2 Gene

Evolution for GAS2L1P2 Gene

ENSEMBL:
Gene Tree for GAS2L1P2 (if available)
TreeFam:
Gene Tree for GAS2L1P2 (if available)

No data available for Orthologs for GAS2L1P2 Gene

Paralogs for GAS2L1P2 Gene

No data available for Paralogs for GAS2L1P2 Gene

Variants for GAS2L1P2 Gene

Sequence variations from dbSNP and Humsavar for GAS2L1P2 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000018105 -- 97,080,750(-) C/A intron_variant
rs1000170498 -- 97,075,221(-) TTTTTTTTT/TTTTT/TTTTTTTT/TTTTTTTTTT downstream_transcript_variant
rs1000328363 -- 97,080,420(-) T/C intron_variant
rs1001187647 -- 97,081,456(-) A/G intron_variant
rs1001318537 -- 97,081,731(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GAS2L1P2 Gene

Variant ID Type Subtype PubMed ID
nsv831662 CNV gain 17160897
nsv950910 CNV deletion 24416366

Additional Variant Information for GAS2L1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAS2L1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GAS2L1P2 Gene

Disorders for GAS2L1P2 Gene

Additional Disease Information for GAS2L1P2

No disorders were found for GAS2L1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GAS2L1P2 Gene

Publications for GAS2L1P2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58

No data available for External Links for GAS2L1P2 Gene

Products for GAS2L1P2 Gene

Sources for GAS2L1P2 Gene

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