Aliases for GARS1P1 Gene

Aliases for GARS1P1 Gene

  • Glycyl-TRNA Synthetase 1 Pseudogene 1 2 3 5
  • Glycyl-TRNA Synthetase Pseudogene 1 2 3
  • GARS1P1 5
  • GARSP1 3

External Ids for GARS1P1 Gene

Previous HGNC Symbols for GARS1P1 Gene

  • GARSP1

Summaries for GARS1P1 Gene

GeneCards Summary for GARS1P1 Gene

GARS1P1 (Glycyl-TRNA Synthetase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for GARS1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GARS1P1 Gene

Genomics for GARS1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GARS1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J055553 Enhancer 0.2 Ensembl 600.7 +0.3 349 0.2 GARS1P1 RF00026-448 RNU6-1249P lnc-SMIM36-7 lnc-SMIM36-5 ENSG00000236319 HSALNG0117533 SMIM36 TMEM100
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GARS1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GARS1P1 Gene

Genomic Locations for GARS1P1 Gene
chr17:55,550,931-55,551,650
(GRCh38/hg38)
Size:
720 bases
Orientation:
Minus strand
chr17:53,628,292-53,629,022
(GRCh37/hg19)
Size:
731 bases
Orientation:
Minus strand

Genomic View for GARS1P1 Gene

Genes around GARS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GARS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GARS1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GARS1P1 Gene

Proteins for GARS1P1 Gene

Post-translational modifications for GARS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GARS1P1 Gene

Domains & Families for GARS1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GARS1P1 Gene

Function for GARS1P1 Gene

Phenotypes From GWAS Catalog for GARS1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GARS1P1 Gene

Localization for GARS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GARS1P1 Gene

Pathways & Interactions for GARS1P1 Gene

PathCards logo

SuperPathways for GARS1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GARS1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GARS1P1 Gene

Drugs & Compounds for GARS1P1 Gene

No Compound Related Data Available

Transcripts for GARS1P1 Gene

mRNA/cDNA for GARS1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GARS1P1 Gene

No ASD Table

Relevant External Links for GARS1P1 Gene

GeneLoc Exon Structure for
GARS1P1

Expression for GARS1P1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GARS1P1 Gene

Orthologs for GARS1P1 Gene

Evolution for GARS1P1 Gene

ENSEMBL:
Gene Tree for GARS1P1 (if available)
TreeFam:
Gene Tree for GARS1P1 (if available)

No data available for Orthologs for GARS1P1 Gene

Paralogs for GARS1P1 Gene

No data available for Paralogs for GARS1P1 Gene

Variants for GARS1P1 Gene

Additional Variant Information for GARS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GARS1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GARS1P1 Gene

Disorders for GARS1P1 Gene

No disorders were found for GARS1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GARS1P1 Gene

Publications for GARS1P1 Gene

No publications were found for GARS1P1 Gene.

No data available for Mastermind for GARS1P1 Gene

Products for GARS1P1 Gene

Sources for GARS1P1 Gene