Aliases for GAPDHP71 Gene

Aliases for GAPDHP71 Gene

  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 71 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase-Like 16, Pseudogene 2 3
  • Glyceraldehyde-3-Phosphate Dehydrogenase-Like 16 2
  • GAPDHL16 3
  • GAPDL16 3

External Ids for GAPDHP71 Gene

Previous HGNC Symbols for GAPDHP71 Gene

  • GAPDL16
  • GAPDHL16

Previous GeneCards Identifiers for GAPDHP71 Gene

  • GC05P173941

Summaries for GAPDHP71 Gene

GeneCards Summary for GAPDHP71 Gene

GAPDHP71 (Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 71) is a Pseudogene.

Additional gene information for GAPDHP71 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GAPDHP71 Gene

Genomics for GAPDHP71 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP71 Gene

Promoters and enhancers for GAPDHP71 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J174514 Enhancer 0.8 FANTOM5 750.6 +1.7 1675 0.2 SP7 KLF14 GLIS2 ZIC2 TCF7L2 PRDM10 ZNF639 ZSCAN4 ZEB2 ZNF629 GAPDHP71 LOC105377739 LINC01411
GH05J174519 Enhancer 1.1 Ensembl ENCODE 0.4 +7.5 7507 2.9 CTCF TCF7L2 CTBP1 HLF ZNF121 SP7 ZSCAN21 SP5 GLIS2 CREB1 ENSG00000253447 ENSG00000249722 ENSG00000251670 ENSG00000254011 ENSG00000248293 NIFKP2 RPL12P22 GAPDHP71 LOC105377739 LINC01411
GH05J174531 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +20.5 20468 5.4 SIN3A GATA3 SMARCE1 POLR2A TCF7L2 CTBP1 ZNF217 ZNF362 MYC MAX NSG2 LOC105377739 GAPDHP71 LINC01411
GH05J174524 Enhancer 0.7 Ensembl ENCODE 0.4 +10.9 10931 1 CTCF ZNF217 ZNF121 OSR2 ESRRA RAD21 SMC3 ZNF366 ZNF335 FEZF1 GAPDHP71 LOC105377739 LINC01411
GH05J174527 Enhancer 0.8 FANTOM5 Ensembl 0.4 +15.5 15452 2.2 ZBTB6 ZNF217 CTBP1 CEBPB ZNF10 DPF2 GATAD2B CUX1 GATA3 ELF1 NSG2 LOC105377739 GAPDHP71 LINC01411
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP71 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP71 Gene

Genomic Locations for GAPDHP71 Gene
chr5:174,513,233-174,514,513
(GRCh38/hg38)
Size:
1,281 bases
Orientation:
Plus strand
chr5:173,940,236-173,941,515
(GRCh37/hg19)
Size:
1,280 bases
Orientation:
Plus strand

Genomic View for GAPDHP71 Gene

Genes around GAPDHP71 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP71 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP71 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP71 Gene

Proteins for GAPDHP71 Gene

Post-translational modifications for GAPDHP71 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP71 Gene

Domains & Families for GAPDHP71 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GAPDHP71 Gene

Function for GAPDHP71 Gene

Phenotypes From GWAS Catalog for GAPDHP71 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP71 Gene

Localization for GAPDHP71 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP71 Gene

Pathways & Interactions for GAPDHP71 Gene

PathCards logo

SuperPathways for GAPDHP71 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GAPDHP71 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP71 Gene

Drugs & Compounds for GAPDHP71 Gene

No Compound Related Data Available

Transcripts for GAPDHP71 Gene

mRNA/cDNA for GAPDHP71 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP71 Gene

No ASD Table

Relevant External Links for GAPDHP71 Gene

GeneLoc Exon Structure for
GAPDHP71
ECgene alternative splicing isoforms for
GAPDHP71

Expression for GAPDHP71 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP71 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP71 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x6.5), Brain - Substantia nigra (x6.1), Brain - Hippocampus (x4.5), and Brain - Amygdala (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP71 Gene:

GAPDHP71
genes like me logo Genes that share expression patterns with GAPDHP71: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP71 Gene

Orthologs for GAPDHP71 Gene

Evolution for GAPDHP71 Gene

ENSEMBL:
Gene Tree for GAPDHP71 (if available)
TreeFam:
Gene Tree for GAPDHP71 (if available)

No data available for Orthologs for GAPDHP71 Gene

Paralogs for GAPDHP71 Gene

No data available for Paralogs for GAPDHP71 Gene

Variants for GAPDHP71 Gene

Additional Variant Information for GAPDHP71 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP71

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP71 Gene

Disorders for GAPDHP71 Gene

No disorders were found for GAPDHP71 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP71 Gene

Publications for GAPDHP71 Gene

No publications were found for GAPDHP71 Gene.

Products for GAPDHP71 Gene

Sources for GAPDHP71 Gene