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Aliases for GAPDHP53 Gene

Subcategory (RNA class) for GAPDHP53 Gene

lncRNA

Aliases for GAPDHP53 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 53 2 3 5

External Ids for GAPDHP53 Gene

ORGUL Members for GAPDHP53 Gene

Previous GeneCards Identifiers for GAPDHP53 Gene

  • GC20U900573

Summaries for GAPDHP53 Gene

GeneCards Summary for GAPDHP53 Gene

GAPDHP53 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 53) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GAPDHP53 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP53 Gene

Genomics for GAPDHP53 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP53 Gene

Promoters and enhancers for GAPDHP53 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J024442 Enhancer 0.7 Ensembl ENCODE 600.7 -1.2 -1190 4 SCRT2 SCRT1 PRDM4 POU5F1 GAPDHP53 SYNDIG1 LOC105372577
GH20J024462 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +17.3 17310 2.6 FOXA2 POLR2A SIN3A GC20M024469 GAPDHP53
GH20J024431 Enhancer 0.7 Ensembl ENCODE 0.4 -13.5 -13478 1.8 SP1 ZFHX2 HNF4A GLIS1 HNF4G EGR2 SYNDIG1 GAPDHP53 LOC105372577
GH20J024453 Enhancer 0.5 Ensembl 0.4 +9.9 9909 3 CREB1 ATF7 ATF2 PKNOX1 GAPDHP53 GC20M024469
GH20J024436 Enhancer 0.4 ENCODE 0.4 -7.8 -7806 1.8 MZF1 FEZF1 ZNF133 SYNDIG1 GAPDHP53 LOC105372577
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP53 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP53 Gene

Genomic Locations for GAPDHP53 Gene
chr20:24,445,391-24,446,314
(GRCh38/hg38)
Size:
924 bases
Orientation:
Plus strand
chr20:24,426,027-24,426,950
(GRCh37/hg19)
Size:
924 bases
Orientation:
Plus strand

Genomic View for GAPDHP53 Gene

Genes around GAPDHP53 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP53 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP53 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP53 Gene

Proteins for GAPDHP53 Gene

Post-translational modifications for GAPDHP53 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP53 Gene

Domains & Families for GAPDHP53 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP53 Gene

Function for GAPDHP53 Gene

Phenotypes From GWAS Catalog for GAPDHP53 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP53 Gene

Localization for GAPDHP53 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP53 Gene

Pathways & Interactions for GAPDHP53 Gene

PathCards logo

SuperPathways for GAPDHP53 Gene

No Data Available

Interacting Proteins for GAPDHP53 Gene

Gene Ontology (GO) - Biological Process for GAPDHP53 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP53 Gene

Drugs & Compounds for GAPDHP53 Gene

No Compound Related Data Available

Transcripts for GAPDHP53 Gene

mRNA/cDNA for GAPDHP53 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP53 Gene

No ASD Table

Relevant External Links for GAPDHP53 Gene

GeneLoc Exon Structure for
GAPDHP53
ECgene alternative splicing isoforms for
GAPDHP53

Expression for GAPDHP53 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP53 Gene

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP53 Gene:

GAPDHP53
genes like me logo Genes that share expression patterns with GAPDHP53: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP53 Gene

Orthologs for GAPDHP53 Gene

Evolution for GAPDHP53 Gene

ENSEMBL:
Gene Tree for GAPDHP53 (if available)
TreeFam:
Gene Tree for GAPDHP53 (if available)

No data available for Orthologs for GAPDHP53 Gene

Paralogs for GAPDHP53 Gene

No data available for Paralogs for GAPDHP53 Gene

Variants for GAPDHP53 Gene

Additional Variant Information for GAPDHP53 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP53

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP53 Gene

Disorders for GAPDHP53 Gene

No disorders were found for GAPDHP53 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP53 Gene

Publications for GAPDHP53 Gene

No publications were found for GAPDHP53 Gene.

No data available for External Links for GAPDHP53 Gene

Products for GAPDHP53 Gene

Sources for GAPDHP53 Gene

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