Aliases for GAPDHP50 Gene

Aliases for GAPDHP50 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 50 2 3 5
  • GAPDHP50 5

External Ids for GAPDHP50 Gene

Previous GeneCards Identifiers for GAPDHP50 Gene

  • GC03U901591

Summaries for GAPDHP50 Gene

GeneCards Summary for GAPDHP50 Gene

GAPDHP50 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 50) is a Pseudogene.

Additional gene information for GAPDHP50 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GAPDHP50 Gene

Genomics for GAPDHP50 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GAPDHP50 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J089048 Enhancer 0.4 Ensembl 600.7 -0.6 -567 0.4 CTCF ZNF143 RAD21 ZNF652 GAPDHP50 lnc-CGGBP1-2 EPHA3 CSNKA2IP
GH03J089046 Enhancer 0.2 Ensembl 600.7 +1.3 1333 1.4 GAPDHP50 lnc-CGGBP1-2 piR-48222-225 EPHA3 CSNKA2IP
GH03J089043 Enhancer 0.4 Ensembl 0.7 +4.8 4833 0.4 FEZF1 SP7 PKNOX1 GAPDHP50 lnc-CGGBP1-2 piR-48222-225 EPHA3 CSNKA2IP
GH03J089100 Enhancer 0.6 Ensembl 0.2 -50.9 -50867 0.2 CTCF ZNF143 RAD21 TRIM22 SMC3 ZNF654 YY1 ARID3A ZNF384 RXRA EPHA3 GAPDHP50 lnc-CGGBP1-2 CSNKA2IP
GH03J089099 Enhancer 0.5 Ensembl 0.2 -50.3 -50267 0.6 CTCF ZNF143 TRIM22 RAD21 ARID3A ZNF384 CGGBP1 EPHA3 GAPDHP50 lnc-CGGBP1-2 CSNKA2IP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP50 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GAPDHP50 Gene

Genomic Locations for GAPDHP50 Gene
chr3:89,047,442-89,048,434
(GRCh38/hg38)
Size:
993 bases
Orientation:
Minus strand
chr3:89,096,592-89,097,584
(GRCh37/hg19)
Size:
993 bases
Orientation:
Minus strand

Genomic View for GAPDHP50 Gene

Genes around GAPDHP50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP50 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP50 Gene

Proteins for GAPDHP50 Gene

Post-translational modifications for GAPDHP50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP50 Gene

Domains & Families for GAPDHP50 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GAPDHP50 Gene

Function for GAPDHP50 Gene

Phenotypes From GWAS Catalog for GAPDHP50 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP50 Gene

Localization for GAPDHP50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP50 Gene

Pathways & Interactions for GAPDHP50 Gene

PathCards logo

SuperPathways for GAPDHP50 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GAPDHP50 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GAPDHP50 Gene

Drugs & Compounds for GAPDHP50 Gene

No Compound Related Data Available

Transcripts for GAPDHP50 Gene

mRNA/cDNA for GAPDHP50 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP50 Gene

No ASD Table

Relevant External Links for GAPDHP50 Gene

GeneLoc Exon Structure for
GAPDHP50

Expression for GAPDHP50 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GAPDHP50 Gene

genes like me logo Genes that share expression patterns with GAPDHP50: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP50 Gene

Orthologs for GAPDHP50 Gene

Evolution for GAPDHP50 Gene

ENSEMBL:
Gene Tree for GAPDHP50 (if available)
TreeFam:
Gene Tree for GAPDHP50 (if available)

No data available for Orthologs for GAPDHP50 Gene

Paralogs for GAPDHP50 Gene

No data available for Paralogs for GAPDHP50 Gene

Variants for GAPDHP50 Gene

Additional Variant Information for GAPDHP50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP50

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP50 Gene

Disorders for GAPDHP50 Gene

No disorders were found for GAPDHP50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP50 Gene

Publications for GAPDHP50 Gene

No publications were found for GAPDHP50 Gene.

No data available for Mastermind for GAPDHP50 Gene

Products for GAPDHP50 Gene

Sources for GAPDHP50 Gene