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Aliases for GAPDHP50 Gene

Subcategory (RNA class) for GAPDHP50 Gene

lncRNA

Aliases for GAPDHP50 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 50 2 3 5

External Ids for GAPDHP50 Gene

ORGUL Members for GAPDHP50 Gene

Previous GeneCards Identifiers for GAPDHP50 Gene

  • GC03U901591

Summaries for GAPDHP50 Gene

GeneCards Summary for GAPDHP50 Gene

GAPDHP50 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 50) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GAPDHP50 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP50 Gene

Genomics for GAPDHP50 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP50 Gene

Promoters and enhancers for GAPDHP50 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J089048 Enhancer 0.4 Ensembl 600.7 -0.6 -567 0.4 ZNF652 CTCF ZNF143 GAPDHP50 GC03M089046
GH03J089046 Enhancer 0.2 Ensembl 600.7 +1.1 1133 1.4 GAPDHP50 GC03M089046 GC03P088989
GH03J089043 Enhancer 0.4 Ensembl 0.7 +4.8 4834 0.4 SP7 PKNOX1 FEZF1 GAPDHP50 GC03P088989
GH03J089025 Enhancer 0.5 ENCODE 0.3 +23.0 23043 0.7 SP7 ZBTB44 OSR2 PRDM6 ZNF362 GAPDHP50 GC03P088989
GH03J089044 Enhancer 0.2 Ensembl 0.7 +3.7 3733 0.6 GAPDHP50 GC03P088989
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP50 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP50 Gene

Genomic Locations for GAPDHP50 Gene
chr3:89,047,442-89,048,434
(GRCh38/hg38)
Size:
993 bases
Orientation:
Minus strand
chr3:89,096,592-89,097,584
(GRCh37/hg19)
Size:
993 bases
Orientation:
Minus strand

Genomic View for GAPDHP50 Gene

Genes around GAPDHP50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP50 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP50 Gene

Proteins for GAPDHP50 Gene

Post-translational modifications for GAPDHP50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP50 Gene

Domains & Families for GAPDHP50 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP50 Gene

Function for GAPDHP50 Gene

Phenotypes From GWAS Catalog for GAPDHP50 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP50 Gene

Localization for GAPDHP50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP50 Gene

Pathways & Interactions for GAPDHP50 Gene

PathCards logo

SuperPathways for GAPDHP50 Gene

No Data Available

Interacting Proteins for GAPDHP50 Gene

Gene Ontology (GO) - Biological Process for GAPDHP50 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP50 Gene

Drugs & Compounds for GAPDHP50 Gene

No Compound Related Data Available

Transcripts for GAPDHP50 Gene

mRNA/cDNA for GAPDHP50 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP50 Gene

No ASD Table

Relevant External Links for GAPDHP50 Gene

GeneLoc Exon Structure for
GAPDHP50
ECgene alternative splicing isoforms for
GAPDHP50

Expression for GAPDHP50 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP50 Gene

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP50 Gene:

GAPDHP50
genes like me logo Genes that share expression patterns with GAPDHP50: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP50 Gene

Orthologs for GAPDHP50 Gene

Evolution for GAPDHP50 Gene

ENSEMBL:
Gene Tree for GAPDHP50 (if available)
TreeFam:
Gene Tree for GAPDHP50 (if available)

No data available for Orthologs for GAPDHP50 Gene

Paralogs for GAPDHP50 Gene

No data available for Paralogs for GAPDHP50 Gene

Variants for GAPDHP50 Gene

Additional Variant Information for GAPDHP50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP50

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP50 Gene

Disorders for GAPDHP50 Gene

No disorders were found for GAPDHP50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP50 Gene

Publications for GAPDHP50 Gene

No publications were found for GAPDHP50 Gene.

No data available for External Links for GAPDHP50 Gene

Products for GAPDHP50 Gene

Sources for GAPDHP50 Gene

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