GAPDHP49 Gene (Pseudogene)

Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 49

GC02M222503
GIFtS:
6

Aliases for GAPDHP49 Gene

Aliases for GAPDHP49 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 49 2 3 5

External Ids for GAPDHP49 Gene

Previous GeneCards Identifiers for GAPDHP49 Gene

  • GC02U902239
  • GC02M215222
  • GC02M223369

Summaries for GAPDHP49 Gene

GeneCards Summary for GAPDHP49 Gene

GAPDHP49 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 49) is a Pseudogene.

Additional gene information for GAPDHP49 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GAPDHP49 Gene

Genomics for GAPDHP49 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP49 Gene

Promoters and enhancers for GAPDHP49 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J222504 Enhancer 0.3 Ensembl 500.7 -0.2 -226 0.7 ELF1 SPI1 GAPDHP49 lnc-FARSB-6 lnc-FARSB-3 SGPP2
GH02J222505 Enhancer 0.2 Ensembl 500.7 -1.6 -1558 1.6 GAPDHP49 lnc-FARSB-6 lnc-FARSB-3 SGPP2
GH02J222518 Enhancer 0.9 Ensembl ENCODE 0.4 -13.8 -13837 2.2 TEAD4 ZIC2 OSR2 WT1 ZNF316 MAFF FOS NR3C1 MAFK STAT3 lnc-FARSB-6 GAPDHP49 lnc-FARSB-3 SGPP2
GH02J222549 Enhancer 0.6 Ensembl ENCODE 0.3 -44.1 -44058 1.4 TEAD4 HDAC2 ZBTB17 CTCF CHD7 CT75 RNU6-619P lnc-FARSB-3 lnc-FARSB-6 GAPDHP49 SGPP2
GH02J222524 Enhancer 0.4 Ensembl 0.4 -19.7 -19658 0.2 BATF BHLHE40 BACH1 lnc-FARSB-6 GAPDHP49 lnc-FARSB-3 SGPP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP49 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP49 Gene

Genomic Locations for GAPDHP49 Gene
chr2:222,503,883-222,504,843
(GRCh38/hg38)
Size:
961 bases
Orientation:
Minus strand
chr2:223,368,602-223,369,562
(GRCh37/hg19)
Size:
961 bases
Orientation:
Minus strand

Genomic View for GAPDHP49 Gene

Genes around GAPDHP49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP49 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for GAPDHP49 Gene

Proteins for GAPDHP49 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GAPDHP49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP49 Gene

Domains & Families for GAPDHP49 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GAPDHP49 Gene

Function for GAPDHP49 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP49 Gene

Localization for GAPDHP49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP49 Gene

Pathways & Interactions for GAPDHP49 Gene

PathCards logo

SuperPathways for GAPDHP49 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for GAPDHP49 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GAPDHP49 Gene

Drugs & Compounds for GAPDHP49 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GAPDHP49 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for GAPDHP49 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP49 Gene

No ASD Table

Relevant External Links for GAPDHP49 Gene

GeneLoc Exon Structure for
GAPDHP49

Expression for GAPDHP49 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GAPDHP49 Gene

mRNA expression in normal human tissues for GAPDHP49 Gene
mRNA expression by GTEx for GAPDHP49 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP49 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x10.2) and Skin - Not Sun Exposed (Suprapubic) (x9.9).
genes like me logo Genes that share expression patterns with GAPDHP49: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP49 Gene

Orthologs for GAPDHP49 Gene

Evolution for GAPDHP49 Gene

ENSEMBL:
Gene Tree for GAPDHP49 (if available)
TreeFam:
Gene Tree for GAPDHP49 (if available)

No data available for Orthologs for GAPDHP49 Gene

Paralogs for GAPDHP49 Gene

No data available for Paralogs for GAPDHP49 Gene

Variants for GAPDHP49 Gene

Additional Variant Information for GAPDHP49 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP49

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP49 Gene

Disorders for GAPDHP49 Gene

No disorders were found for GAPDHP49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP49 Gene

Publications for GAPDHP49 Gene

No publications were found for GAPDHP49 Gene.

No data available for Mastermind for GAPDHP49 Gene

Products for GAPDHP49 Gene

Sources for GAPDHP49 Gene