Aliases for GAPDHP46 Gene

Aliases for GAPDHP46 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 46 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 3
  • GAPDHP46 5

External Ids for GAPDHP46 Gene

Previous GeneCards Identifiers for GAPDHP46 Gene

  • GC01M092581
  • GC01M090700

Summaries for GAPDHP46 Gene

GeneCards Summary for GAPDHP46 Gene

GAPDHP46 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 46) is a Pseudogene.

Additional gene information for GAPDHP46 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GAPDHP46 Gene

Genomics for GAPDHP46 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GAPDHP46 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J092117 Enhancer 0.5 Ensembl 250.7 -1.8 -1769 0.8 MAFF ZNF316 MAFK MAFG ZBTB40 ZBTB17 EMSY GAPDHP46 piR-42694-011 EPHX4 BRDT BTBD8 C1orf146
GH01J092079 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +35.1 35131 2.2 ZNF600 POLR2A ZIC2 ZBTB10 YY1 NONO SMAD5 MBD2 ZNF341 MNT BTBD8 RPAP2 SNORA66 SNORD21 RPL5 GAPDHP46 C1orf146
GH01J092095 Enhancer 0.5 Ensembl 0.4 +20.1 20131 3.4 NFE2 SPI1 POLR2A ZNF384 ATF2 HLF PRDM1 BTBD8 GAPDHP46 C1orf146
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP46 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GAPDHP46 Gene

Latest Assembly
chr1:92,114,639-92,115,832
(GRCh38/hg38)
Size:
1,194 bases
Orientation:
Minus strand

Previous Assembly
chr1:92,580,196-92,581,389
(GRCh37/hg19 by Entrez Gene)
Size:
1,194 bases
Orientation:
Minus strand

chr1:92,580,360-92,581,353
(GRCh37/hg19 by Ensembl)
Size:
994 bases
Orientation:
Minus strand

Genomic View for GAPDHP46 Gene

Genes around GAPDHP46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP46 Gene

Proteins for GAPDHP46 Gene

Post-translational modifications for GAPDHP46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP46 Gene

Domains & Families for GAPDHP46 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GAPDHP46 Gene

Function for GAPDHP46 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP46 Gene

Localization for GAPDHP46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP46 Gene

Pathways & Interactions for GAPDHP46 Gene

PathCards logo

SuperPathways for GAPDHP46 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GAPDHP46 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GAPDHP46 Gene

Drugs & Compounds for GAPDHP46 Gene

No Compound Related Data Available

Transcripts for GAPDHP46 Gene

mRNA/cDNA for GAPDHP46 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP46 Gene

No ASD Table

Relevant External Links for GAPDHP46 Gene

GeneLoc Exon Structure for
GAPDHP46

Expression for GAPDHP46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GAPDHP46 Gene

genes like me logo Genes that share expression patterns with GAPDHP46: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP46 Gene

Orthologs for GAPDHP46 Gene

Evolution for GAPDHP46 Gene

ENSEMBL:
Gene Tree for GAPDHP46 (if available)
TreeFam:
Gene Tree for GAPDHP46 (if available)
Alliance of Genome Resources:
Additional Orthologs for GAPDHP46

No data available for Orthologs for GAPDHP46 Gene

Paralogs for GAPDHP46 Gene

No data available for Paralogs for GAPDHP46 Gene

Variants for GAPDHP46 Gene

Additional Variant Information for GAPDHP46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP46
Leiden Open Variation Database (LOVD)
GAPDHP46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP46 Gene

Disorders for GAPDHP46 Gene

No disorders were found for GAPDHP46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP46 Gene

Publications for GAPDHP46 Gene

No publications were found for GAPDHP46 Gene.

No data available for Mastermind for GAPDHP46 Gene

Products for GAPDHP46 Gene

Sources for GAPDHP46 Gene