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Aliases for GAPDHP45 Gene

Subcategory (RNA class) for GAPDHP45 Gene

lncRNA

Aliases for GAPDHP45 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 45 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 3

External Ids for GAPDHP45 Gene

ORGUL Members for GAPDHP45 Gene

Previous GeneCards Identifiers for GAPDHP45 Gene

  • GC10M015136
  • GC10M015137
  • GC10M015139

Summaries for GAPDHP45 Gene

GeneCards Summary for GAPDHP45 Gene

GAPDHP45 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 45) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GAPDHP45 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP45 Gene

Genomics for GAPDHP45 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP45 Gene

Promoters and enhancers for GAPDHP45 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J014836 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.7 +255.5 255512 3.8 ZFX SP1 ELF3 MNT NKRF ZNF121 CEBPG POLR2A GTF2F1 ZNF687 ENSG00000284024 HSPA14 CDNF SUV39H2 GAPDHP45 RPP38 RPP38-DT FAM107B
GH10J015140 Promoter/Enhancer 1.3 Ensembl ENCODE 11.2 -47.9 -47865 1.4 SP1 NKRF CREM PRDM1 MLLT1 IKZF1 BACH1 IKZF2 TRIM22 HDAC1 ACBD7 ENSG00000228181 NMT2 RPP38 RPP38-DT GAPDHP45 DCLRE1CP1 PPIAP30 GC10P015124
GH10J014530 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 9.2 +561.1 561123 3.5 ELF3 ZNF121 CEBPG MAFK TFE3 SP1 HNF1A SP5 ZNF644 RXRA CDNF HSPA14 SUV39H2 DCLRE1CP1 ACBD7 GAPDHP45 FAM107B GC10M014524 ENSG00000236495
GH10J015122 Enhancer 1.2 FANTOM5 Ensembl ENCODE 11.7 -29.9 -29913 2.3 NKRF MLLT1 IKZF1 ZBTB33 IKZF2 RELA ZNF143 TRIM22 PKNOX1 DPF2 GC10P015124 RPP38-DT ACBD7 GAPDHP45 RPP38 DCLRE1CP1 OLAH LOC105376431 GC10P015108 NMT2
GH10J015151 Enhancer 1 Ensembl ENCODE 11 -58.9 -58879 2.2 ZNF652 ELF3 SP1 PPARG SP5 ZNF644 RXRA SOX13 GATAD2A RXRB RPP38 GAPDHP45 RPP38-DT OLAH CDNF HSPA14 ACBD7 PPIAP30 NMT2 GC10P015124
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP45 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP45 Gene

Genomic Locations for GAPDHP45 Gene
chr10:15,093,061-15,093,613
(GRCh38/hg38)
Size:
553 bases
Orientation:
Minus strand
chr10:15,135,060-15,135,612
(GRCh37/hg19)
Size:
553 bases
Orientation:
Minus strand

Genomic View for GAPDHP45 Gene

Genes around GAPDHP45 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP45 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP45 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP45 Gene

Proteins for GAPDHP45 Gene

Post-translational modifications for GAPDHP45 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP45 Gene

Domains & Families for GAPDHP45 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP45 Gene

Function for GAPDHP45 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP45 Gene

Localization for GAPDHP45 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP45 Gene

Pathways & Interactions for GAPDHP45 Gene

PathCards logo

SuperPathways for GAPDHP45 Gene

No Data Available

Interacting Proteins for GAPDHP45 Gene

Gene Ontology (GO) - Biological Process for GAPDHP45 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP45 Gene

Drugs & Compounds for GAPDHP45 Gene

No Compound Related Data Available

Transcripts for GAPDHP45 Gene

mRNA/cDNA for GAPDHP45 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP45 Gene

No ASD Table

Relevant External Links for GAPDHP45 Gene

GeneLoc Exon Structure for
GAPDHP45
ECgene alternative splicing isoforms for
GAPDHP45

Expression for GAPDHP45 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP45 Gene

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP45 Gene:

GAPDHP45
genes like me logo Genes that share expression patterns with GAPDHP45: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP45 Gene

Orthologs for GAPDHP45 Gene

Evolution for GAPDHP45 Gene

ENSEMBL:
Gene Tree for GAPDHP45 (if available)
TreeFam:
Gene Tree for GAPDHP45 (if available)

No data available for Orthologs for GAPDHP45 Gene

Paralogs for GAPDHP45 Gene

No data available for Paralogs for GAPDHP45 Gene

Variants for GAPDHP45 Gene

Additional Variant Information for GAPDHP45 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP45

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP45 Gene

Disorders for GAPDHP45 Gene

No disorders were found for GAPDHP45 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP45 Gene

Publications for GAPDHP45 Gene

No publications were found for GAPDHP45 Gene.

No data available for External Links for GAPDHP45 Gene

Products for GAPDHP45 Gene

Sources for GAPDHP45 Gene

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