Aliases for GAPDHP44 Gene

Aliases for GAPDHP44 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 44 2 3 5
  • GAPDH 3

External Ids for GAPDHP44 Gene

Previous GeneCards Identifiers for GAPDHP44 Gene

  • GC12P063148

Summaries for GAPDHP44 Gene

GeneCards Summary for GAPDHP44 Gene

GAPDHP44 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 44) is a Pseudogene.

Additional gene information for GAPDHP44 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GAPDHP44 Gene

Genomics for GAPDHP44 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP44 Gene

Promoters and enhancers for GAPDHP44 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J062757 Enhancer 0.8 Ensembl dbSUPER 0.7 +2.8 2848 2.4 TCF12 FOS ZIC2 FOSL2 BCL6 TAF1 JUND GATA2 BHLHE40 NR3C1 piR-30188-044 piR-32559-090 piR-60246-042 GAPDHP44 PPM1H
GH12J062751 Enhancer 0.7 Ensembl ENCODE 0.7 -3.8 -3757 1.2 TCF12 FOSL2 ATF3 NR3C1 ELF1 FOXA1 REST SP1 MON2 GAPDHP44 RF01045-032 PPM1H
GH12J062744 Enhancer 0.8 ENCODE dbSUPER 0.4 -10.1 -10147 1.8 TCF12 ZNF316 POLR2A GABPA SRF SPI1 NFE2 BATF IRF4 EBF1 MON2 RF01045-032 GAPDHP44 PPM1H
GH12J062736 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -16.8 -16753 4.4 POLR2A ZNF335 PRDM1 SMARCA4 EZH2 RF01045-032 lnc-MON2-6 GAPDHP44 PPM1H
GH12J062748 Enhancer 0.4 Ensembl dbSUPER 0.4 -6.2 -6152 1.2 SREBF1 GAPDHP44 RF01045-032 PPM1H
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP44 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP44 Gene

Genomic Locations for GAPDHP44 Gene
chr12:62,755,153-62,756,433
(GRCh38/hg38)
Size:
1,281 bases
Orientation:
Plus strand
chr12:63,148,933-63,150,213
(GRCh37/hg19)
Size:
1,281 bases
Orientation:
Plus strand

Genomic View for GAPDHP44 Gene

Genes around GAPDHP44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP44 Gene

Proteins for GAPDHP44 Gene

Post-translational modifications for GAPDHP44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP44 Gene

Domains & Families for GAPDHP44 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GAPDHP44 Gene

Function for GAPDHP44 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GAPDHP44 Gene

Localization for GAPDHP44 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP44 Gene

Pathways & Interactions for GAPDHP44 Gene

PathCards logo

SuperPathways for GAPDHP44 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for GAPDHP44 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GAPDHP44 Gene

Drugs & Compounds for GAPDHP44 Gene

No Compound Related Data Available

Transcripts for GAPDHP44 Gene

mRNA/cDNA for GAPDHP44 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP44 Gene

No ASD Table

Relevant External Links for GAPDHP44 Gene

GeneLoc Exon Structure for
GAPDHP44

Expression for GAPDHP44 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GAPDHP44 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP44 Gene

This gene is overexpressed in Muscle - Skeletal (x6.3) and Brain - Cerebellum (x4.0).
genes like me logo Genes that share expression patterns with GAPDHP44: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP44 Gene

Orthologs for GAPDHP44 Gene

Evolution for GAPDHP44 Gene

ENSEMBL:
Gene Tree for GAPDHP44 (if available)
TreeFam:
Gene Tree for GAPDHP44 (if available)

No data available for Orthologs for GAPDHP44 Gene

Paralogs for GAPDHP44 Gene

No data available for Paralogs for GAPDHP44 Gene

Variants for GAPDHP44 Gene

Additional Variant Information for GAPDHP44 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP44 Gene

Disorders for GAPDHP44 Gene

Additional Disease Information for GAPDHP44

No disorders were found for GAPDHP44 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GAPDHP44 Gene

Publications for GAPDHP44 Gene

  1. Basic biology of GAPDH. (PMID: 22851445) Seidler NW (Advances in experimental medicine and biology 2013) 3 54
  2. The abundance of processed pseudogenes derived from glycolytic genes is correlated with their expression level. (PMID: 22309162) McDonell L … Drouin G (Genome 2012) 3 54
  3. Comprehensive analysis of the pseudogenes of glycolytic enzymes in vertebrates: the anomalously high number of GAPDH pseudogenes highlights a recent burst of retrotrans-positional activity. (PMID: 19835609) Liu YJ … Gerstein MB (BMC genomics 2009) 3 54

Products for GAPDHP44 Gene

Sources for GAPDHP44 Gene