Aliases for GAPDHP39 Gene

Aliases for GAPDHP39 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 39 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 3
  • GAPDHP39 5

External Ids for GAPDHP39 Gene

Previous GeneCards Identifiers for GAPDHP39 Gene

  • GC03P138497
  • GC03P135871

Summaries for GAPDHP39 Gene

GeneCards Summary for GAPDHP39 Gene

GAPDHP39 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 39) is a Pseudogene.

Additional gene information for GAPDHP39 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GAPDHP39 Gene

Genomics for GAPDHP39 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GAPDHP39 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J138776 Enhancer 0.6 Ensembl dbSUPER 600.7 +1.0 1041 0.4 ATF7 RBM22 ATF2 GAPDHP39 FAIM CEP70 PIK3CB piR-42701-024
GH03J138773 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.8 -2754 2.3 PRDM10 ZNF629 ZNF692 JUND FOXA1 PRDM1 ZNF600 SCRT2 SOX13 ZBTB44 PIK3CB FAIM GAPDHP39 lnc-CEP70-2
GH03J138780 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 +4.3 4340 3.8 ZBTB17 RBM22 GATA3 IRF2 ZNF384 TAL1 FEZF1 PRDM10 GLIS1 MEIS2 FAIM CEP70 GAPDHP39 piR-42701-024 PIK3CB
GH03J138767 Enhancer 0.7 dbSUPER 0.4 -9.9 -9878 1.5 LEF1 ZNF143 ZNF24 SOX6 CBX3 ZNF184 MTA3 CTBP1 AFF1 XRCC3 DBR1 DZIP1L PIK3CB FAIM CEP70 ACTG1P1 COPB2 GAPDHP39 lnc-CEP70-2
GH03J138757 Enhancer 0.9 Ensembl dbSUPER 0.4 -20.3 -20260 1 IKZF1 TARDBP ETV6 MTA2 ZSCAN4 MTA1 ZNF24 DPF2 HDAC1 SOX6 lnc-CEP70-2 GAPDHP39 PIK3CB FAIM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP39 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GAPDHP39 Gene

Genomic Locations for GAPDHP39 Gene
chr3:138,777,760-138,779,011
(GRCh38/hg38)
Size:
1,252 bases
Orientation:
Plus strand
chr3:138,496,602-138,497,853
(GRCh37/hg19)
Size:
1,252 bases
Orientation:
Plus strand

Genomic View for GAPDHP39 Gene

Genes around GAPDHP39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP39 Gene

Proteins for GAPDHP39 Gene

Post-translational modifications for GAPDHP39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP39 Gene

Domains & Families for GAPDHP39 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GAPDHP39 Gene

Function for GAPDHP39 Gene

Phenotypes From GWAS Catalog for GAPDHP39 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP39 Gene

Localization for GAPDHP39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP39 Gene

Pathways & Interactions for GAPDHP39 Gene

PathCards logo

SuperPathways for GAPDHP39 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GAPDHP39 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GAPDHP39 Gene

Drugs & Compounds for GAPDHP39 Gene

No Compound Related Data Available

Transcripts for GAPDHP39 Gene

mRNA/cDNA for GAPDHP39 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP39 Gene

No ASD Table

Relevant External Links for GAPDHP39 Gene

GeneLoc Exon Structure for
GAPDHP39

Expression for GAPDHP39 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GAPDHP39 Gene

genes like me logo Genes that share expression patterns with GAPDHP39: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP39 Gene

Orthologs for GAPDHP39 Gene

Evolution for GAPDHP39 Gene

ENSEMBL:
Gene Tree for GAPDHP39 (if available)
TreeFam:
Gene Tree for GAPDHP39 (if available)

No data available for Orthologs for GAPDHP39 Gene

Paralogs for GAPDHP39 Gene

No data available for Paralogs for GAPDHP39 Gene

Variants for GAPDHP39 Gene

Additional Variant Information for GAPDHP39 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP39

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP39 Gene

Disorders for GAPDHP39 Gene

No disorders were found for GAPDHP39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP39 Gene

Publications for GAPDHP39 Gene

No publications were found for GAPDHP39 Gene.

No data available for Mastermind for GAPDHP39 Gene

Products for GAPDHP39 Gene

Sources for GAPDHP39 Gene