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Aliases for GAPDHP39 Gene

Aliases for GAPDHP39 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 39 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 3

External Ids for GAPDHP39 Gene

Previous GeneCards Identifiers for GAPDHP39 Gene

  • GC03P138497
  • GC03P135871

Summaries for GAPDHP39 Gene

GeneCards Summary for GAPDHP39 Gene

GAPDHP39 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 39) is a Pseudogene.

Additional gene information for GAPDHP39 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP39 Gene

Genomics for GAPDHP39 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP39 Gene

Promoters and enhancers for GAPDHP39 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J138776 Enhancer 0.4 dbSUPER 600.7 +0.1 120 2.5 ATF7 FOXA1 ATF2 GAPDHP39 FAIM CEP70 PIK3CB RPL23AP40 GC03M138772
GH03J138780 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +3.3 3331 0.9 ZBTB17 IRF2 GATA3 FEZF1 GLIS1 FAIM CEP70 GAPDHP39 RPL23AP40 GC03M138772 PIK3CB
GH03J138773 Enhancer 1.1 ENCODE dbSUPER 0.7 -2.8 -2754 2.3 ZSCAN21 SP7 PRDM1 ZNF644 FOSL2 CREB1 POLR2A ZNF600 PRDM10 ZEB2 PIK3CB FAIM GAPDHP39 GC03M138772 GC03P138644
GH03J138744 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -32.7 -32659 1.4 CC2D1A ZNF384 MNT NFIC VEZF1 ZBTB33 SMARCA5 GAPDHP39 PIK3CB GC03P138644
GH03J138786 Enhancer 0.8 ENCODE dbSUPER 0.4 +9.5 9466 1.8 CEBPG CEBPA GATAD2A SOX13 YY1 CEBPB FEZF1 PRDM6 NR2F6 POLR2A PIK3CB CEP70 FAIM RPL23AP40 GAPDHP39 GC03M138772
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP39 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP39 Gene

Genomic Locations for GAPDHP39 Gene
chr3:138,777,760-138,779,011
(GRCh38/hg38)
Size:
1,252 bases
Orientation:
Plus strand
chr3:138,496,602-138,497,853
(GRCh37/hg19)
Size:
1,252 bases
Orientation:
Plus strand

Genomic View for GAPDHP39 Gene

Genes around GAPDHP39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP39 Gene

Proteins for GAPDHP39 Gene

Post-translational modifications for GAPDHP39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP39 Gene

Domains & Families for GAPDHP39 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP39 Gene

Function for GAPDHP39 Gene

Phenotypes From GWAS Catalog for GAPDHP39 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP39 Gene

Localization for GAPDHP39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP39 Gene

Pathways & Interactions for GAPDHP39 Gene

PathCards logo

SuperPathways for GAPDHP39 Gene

No Data Available

Interacting Proteins for GAPDHP39 Gene

Gene Ontology (GO) - Biological Process for GAPDHP39 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP39 Gene

Drugs & Compounds for GAPDHP39 Gene

No Compound Related Data Available

Transcripts for GAPDHP39 Gene

mRNA/cDNA for GAPDHP39 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP39 Gene

No ASD Table

Relevant External Links for GAPDHP39 Gene

GeneLoc Exon Structure for
GAPDHP39
ECgene alternative splicing isoforms for
GAPDHP39

Expression for GAPDHP39 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP39 Gene

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP39 Gene:

GAPDHP39
genes like me logo Genes that share expression patterns with GAPDHP39: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP39 Gene

Orthologs for GAPDHP39 Gene

Evolution for GAPDHP39 Gene

ENSEMBL:
Gene Tree for GAPDHP39 (if available)
TreeFam:
Gene Tree for GAPDHP39 (if available)

No data available for Orthologs for GAPDHP39 Gene

Paralogs for GAPDHP39 Gene

No data available for Paralogs for GAPDHP39 Gene

Variants for GAPDHP39 Gene

Additional Variant Information for GAPDHP39 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP39

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP39 Gene

Disorders for GAPDHP39 Gene

No disorders were found for GAPDHP39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP39 Gene

Publications for GAPDHP39 Gene

No publications were found for GAPDHP39 Gene.

No data available for External Links for GAPDHP39 Gene

Products for GAPDHP39 Gene

Sources for GAPDHP39 Gene

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