Aliases for GAPDHP38 Gene

Aliases for GAPDHP38 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 38 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 3
  • GAPDHP38 5

External Ids for GAPDHP38 Gene

Previous GeneCards Identifiers for GAPDHP38 Gene

  • GC19P047061

Summaries for GAPDHP38 Gene

GeneCards Summary for GAPDHP38 Gene

GAPDHP38 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 38) is a Pseudogene.

Additional gene information for GAPDHP38 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GAPDHP38 Gene

Genomics for GAPDHP38 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GAPDHP38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046559 Enhancer 0.2 FANTOM5 600.7 +0.6 636 0.2 GAPDHP38 GNG8 RF00017-3023 ENSG00000268423 PPP5D1 CALM3 PNMA8B
GH19J046839 Enhancer 1.2 Ensembl ENCODE dbSUPER 5.1 +282.7 282707 3.9 CTCF TEAD4 PRDM10 IKZF1 KDM1A PKNOX1 REST RAD21 TRIM22 YY1 CCDC61 SYMPK STRN4 ZC3H4 AP2S1 GAPDHP38 lnc-SLC1A5-1 piR-35307 SLC1A5
GH19J046546 Enhancer 0.9 ENCODE 0.4 -11.8 -11761 0.9 CEBPG GATAD2A PRDM10 TFE3 SIX5 IKZF1 PRDM1 ZNF143 RXRB REST ZC3H4 ENSG00000268810 DM1-AS CCDC61 GNG8 ENSG00000259605 GAPDHP38 LOC101928145 ENSG00000278797 ENSG00000268423
GH19J046542 Enhancer 0.7 ENCODE 0.4 -15.7 -15701 0.2 CTCF RFX1 ZNF143 PKNOX1 REST RAD21 TRIM22 ZNF341 ATF7 CEBPB GNG8 ENSG00000278797 LOC101928145 GAPDHP38 PNMA8B CALM3 PPP5D1
GH19J046537 Enhancer 0.7 Ensembl ENCODE 0.4 -20.8 -20759 1.2 CTCF ZNF143 TRIM22 ZNF444 USF1 SMARCA5 RAD21 CREM ZNF3 XRCC5 MIR320E ENSG00000278797 LOC101928145 GAPDHP38 PNMA8B PPP5D1 CALM3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP38 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GAPDHP38 Gene

Genomic Locations for GAPDHP38 Gene
chr19:46,558,560-46,559,844
(GRCh38/hg38)
Size:
1,285 bases
Orientation:
Plus strand
chr19:47,061,817-47,063,100
(GRCh37/hg19)
Size:
1,284 bases
Orientation:
Plus strand

Genomic View for GAPDHP38 Gene

Genes around GAPDHP38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP38 Gene

Proteins for GAPDHP38 Gene

Post-translational modifications for GAPDHP38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP38 Gene

Domains & Families for GAPDHP38 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GAPDHP38 Gene

Function for GAPDHP38 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP38 Gene

Localization for GAPDHP38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP38 Gene

Pathways & Interactions for GAPDHP38 Gene

PathCards logo

SuperPathways for GAPDHP38 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GAPDHP38 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GAPDHP38 Gene

Drugs & Compounds for GAPDHP38 Gene

No Compound Related Data Available

Transcripts for GAPDHP38 Gene

mRNA/cDNA for GAPDHP38 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP38 Gene

No ASD Table

Relevant External Links for GAPDHP38 Gene

GeneLoc Exon Structure for
GAPDHP38

Expression for GAPDHP38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GAPDHP38 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP38 Gene

This gene is overexpressed in Pituitary (x4.7).
genes like me logo Genes that share expression patterns with GAPDHP38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP38 Gene

Orthologs for GAPDHP38 Gene

Evolution for GAPDHP38 Gene

ENSEMBL:
Gene Tree for GAPDHP38 (if available)
TreeFam:
Gene Tree for GAPDHP38 (if available)

No data available for Orthologs for GAPDHP38 Gene

Paralogs for GAPDHP38 Gene

No data available for Paralogs for GAPDHP38 Gene

Variants for GAPDHP38 Gene

Additional Variant Information for GAPDHP38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP38 Gene

Disorders for GAPDHP38 Gene

No disorders were found for GAPDHP38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP38 Gene

Publications for GAPDHP38 Gene

No publications were found for GAPDHP38 Gene.

No data available for Mastermind for GAPDHP38 Gene

Products for GAPDHP38 Gene

Sources for GAPDHP38 Gene