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Aliases for GAPDHP38 Gene

Aliases for GAPDHP38 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 38 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 3

External Ids for GAPDHP38 Gene

Previous GeneCards Identifiers for GAPDHP38 Gene

  • GC19P047061

Summaries for GAPDHP38 Gene

GeneCards Summary for GAPDHP38 Gene

GAPDHP38 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 38) is a Pseudogene.

Additional gene information for GAPDHP38 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP38 Gene

Genomics for GAPDHP38 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP38 Gene

Promoters and enhancers for GAPDHP38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046559 Enhancer 0.2 FANTOM5 600.7 +0.6 636 0.2 GAPDHP38 GNG8 PIR33284 ENSG00000268423 PPP5D1
GH19J046839 Enhancer 1.3 Ensembl ENCODE dbSUPER 5.1 +282.4 282407 3.3 CTCF MLLT1 ZNF384 BACH1 SP7 CREM RAD21 CREB1 IKZF1 PRDM10 CCDC61 SYMPK STRN4 ZC3H4 AP2S1 GAPDHP38 PIR58352 SNAR-E
GH19J046838 Promoter/Enhancer 0.8 Ensembl dbSUPER 4.9 +280.2 280240 0.8 ZNF362 GAPDHP38 SNAR-E PIR58352 AP2S1
GH19J046546 Enhancer 0.9 ENCODE 0.4 -11.8 -11761 0.9 SP1 SIX5 CBFA2T2 CEBPG MYC TFE3 YY1 PRDM1 ZNF680 KAT8 ZC3H4 ENSG00000268810 DM1-AS CCDC61 GNG8 ENSG00000259605 GAPDHP38 LOC101928145 ENSG00000278797 PPP5D1
GH19J046542 Enhancer 0.7 ENCODE 0.4 -15.7 -15701 0.2 CC2D1A CTCF ZNF121 CSDE1 RAD21 PKNOX1 RFX1 ZNF143 REST TRIM22 GNG8 LOC101928145 ENSG00000278797 GAPDHP38 PPP5D1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP38 Gene

Genomic Locations for GAPDHP38 Gene
chr19:46,558,560-46,559,844
(GRCh38/hg38)
Size:
1,285 bases
Orientation:
Plus strand
chr19:47,061,817-47,063,100
(GRCh37/hg19)
Size:
1,284 bases
Orientation:
Plus strand

Genomic View for GAPDHP38 Gene

Genes around GAPDHP38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP38 Gene

Proteins for GAPDHP38 Gene

Post-translational modifications for GAPDHP38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP38 Gene

Domains & Families for GAPDHP38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP38 Gene

Function for GAPDHP38 Gene

Phenotypes From GWAS Catalog for GAPDHP38 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP38 Gene

Localization for GAPDHP38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP38 Gene

Pathways & Interactions for GAPDHP38 Gene

PathCards logo

SuperPathways for GAPDHP38 Gene

No Data Available

Interacting Proteins for GAPDHP38 Gene

Gene Ontology (GO) - Biological Process for GAPDHP38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP38 Gene

Drugs & Compounds for GAPDHP38 Gene

No Compound Related Data Available

Transcripts for GAPDHP38 Gene

mRNA/cDNA for GAPDHP38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP38 Gene

No ASD Table

Relevant External Links for GAPDHP38 Gene

GeneLoc Exon Structure for
GAPDHP38
ECgene alternative splicing isoforms for
GAPDHP38

Expression for GAPDHP38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP38 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP38 Gene

This gene is overexpressed in Pituitary (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP38 Gene:

GAPDHP38
genes like me logo Genes that share expression patterns with GAPDHP38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP38 Gene

Orthologs for GAPDHP38 Gene

Evolution for GAPDHP38 Gene

ENSEMBL:
Gene Tree for GAPDHP38 (if available)
TreeFam:
Gene Tree for GAPDHP38 (if available)

No data available for Orthologs for GAPDHP38 Gene

Paralogs for GAPDHP38 Gene

No data available for Paralogs for GAPDHP38 Gene

Variants for GAPDHP38 Gene

Additional Variant Information for GAPDHP38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP38 Gene

Disorders for GAPDHP38 Gene

No disorders were found for GAPDHP38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP38 Gene

Publications for GAPDHP38 Gene

No publications were found for GAPDHP38 Gene.

No data available for External Links for GAPDHP38 Gene

Products for GAPDHP38 Gene

Sources for GAPDHP38 Gene

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