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Aliases for GAPDHP28 Gene

Aliases for GAPDHP28 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 28 2 3 5
  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 3

External Ids for GAPDHP28 Gene

Previous GeneCards Identifiers for GAPDHP28 Gene

  • GC10M093426
  • GC10M087054

Summaries for GAPDHP28 Gene

GeneCards Summary for GAPDHP28 Gene

GAPDHP28 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 28) is a Pseudogene.

Additional gene information for GAPDHP28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP28 Gene

Genomics for GAPDHP28 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP28 Gene

Promoters and enhancers for GAPDHP28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J091668 Enhancer 0.2 Ensembl 1000.6 -1.6 -1649 1.8 GAPDHP28 GC10M091667 TNKS2-AS1 TNKS2 PPP1R3C HECTD2 GC10M091739
GH10J092590 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE 14.6 -925.3 -925288 5.7 MNT SP1 ZFX CTCF ELF3 SIX5 RERE MLLT1 ZNF687 POLR2A KIF11 GC10P092594 GC10P092595 BTAF1 RPL17P34 TNKS2 FAF2P1 GAPDHP28 MYOF EIF2S2P3
GH10J092572 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.6 -905.5 -905549 4 SREBF1 SP1 ZFX CTCF ELF3 ZNF652 RERE GTF2F1 MLLT1 ZNF687 IDE BTAF1 RPL17P34 FAF2P1 GAPDHP28 MYOF TNKS2 MARK2P9 EIF2S2P3 GC10M092559
GH10J091671 Enhancer 0.8 ENCODE 0.6 -4.5 -4512 1.2 SMARCA4 IKZF1 GMEB1 POLR2A PRDM10 ZNF600 PKNOX1 HDAC1 ZNF501 CTBP1 PPP1R3C HECTD2 GAPDHP28 GC10M091739
GH10J091689 Enhancer 0.9 Ensembl ENCODE 0.3 -22.3 -22279 0.9 SP1 PRDM1 RXRA FOXA2 CEBPB JUND ATF3 ZBTB33 YY1 GATA3 HECTD2 GAPDHP28 GC10M091739
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP28 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP28 Gene

Genomic Locations for GAPDHP28 Gene
chr10:91,666,581-91,667,852
(GRCh38/hg38)
Size:
1,272 bases
Orientation:
Minus strand
chr10:93,426,338-93,427,609
(GRCh37/hg19)
Size:
1,272 bases
Orientation:
Minus strand

Genomic View for GAPDHP28 Gene

Genes around GAPDHP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP28 Gene

Proteins for GAPDHP28 Gene

Post-translational modifications for GAPDHP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP28 Gene

Domains & Families for GAPDHP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP28 Gene

Function for GAPDHP28 Gene

Phenotypes From GWAS Catalog for GAPDHP28 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP28 Gene

Localization for GAPDHP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP28 Gene

Pathways & Interactions for GAPDHP28 Gene

PathCards logo

SuperPathways for GAPDHP28 Gene

No Data Available

Interacting Proteins for GAPDHP28 Gene

Gene Ontology (GO) - Biological Process for GAPDHP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP28 Gene

Drugs & Compounds for GAPDHP28 Gene

No Compound Related Data Available

Transcripts for GAPDHP28 Gene

mRNA/cDNA for GAPDHP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP28 Gene

No ASD Table

Relevant External Links for GAPDHP28 Gene

GeneLoc Exon Structure for
GAPDHP28
ECgene alternative splicing isoforms for
GAPDHP28

Expression for GAPDHP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP28 Gene:

GAPDHP28
genes like me logo Genes that share expression patterns with GAPDHP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP28 Gene

Orthologs for GAPDHP28 Gene

Evolution for GAPDHP28 Gene

ENSEMBL:
Gene Tree for GAPDHP28 (if available)
TreeFam:
Gene Tree for GAPDHP28 (if available)

No data available for Orthologs for GAPDHP28 Gene

Paralogs for GAPDHP28 Gene

No data available for Paralogs for GAPDHP28 Gene

Variants for GAPDHP28 Gene

Additional Variant Information for GAPDHP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP28 Gene

Disorders for GAPDHP28 Gene

Additional Disease Information for GAPDHP28

Genetic Association Database
(GAD)

No disorders were found for GAPDHP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GAPDHP28 Gene

Publications for GAPDHP28 Gene

  1. Genome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI's Framingham Heart Study. (PMID: 17903303) O'Donnell CJ … Demissie S (BMC medical genetics 2007) 45 58

No data available for External Links for GAPDHP28 Gene

Products for GAPDHP28 Gene

Sources for GAPDHP28 Gene

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