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Aliases for GAPDHP27 Gene

Aliases for GAPDHP27 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 27 2 3 5

External Ids for GAPDHP27 Gene

Previous GeneCards Identifiers for GAPDHP27 Gene

  • GC01M120102
  • GC01M120103

Summaries for GAPDHP27 Gene

GeneCards Summary for GAPDHP27 Gene

GAPDHP27 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 27) is a Pseudogene.

Additional gene information for GAPDHP27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP27 Gene

Genomics for GAPDHP27 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP27 Gene

Promoters and enhancers for GAPDHP27 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J119561 Enhancer 0.2 Ensembl 600.7 -1.7 -1656 0.2 GAPDHP27 ZNF697 HSD3BP4
GH01J119553 Enhancer 1 Ensembl ENCODE 0.4 +6.0 5988 3.3 CBFA2T2 SP7 PRDM1 MZF1 ZNF680 ZBTB8A PRDM10 ZIC2 SP1 ZNF692 ZNF697 PHGDH GAPDHP27 HSD3BP3
GH01J119542 Enhancer 0.9 Ensembl ENCODE 0.4 +17.4 17418 2.5 SP1 CREB1 RXRA CEBPA CTBP1 ZNF341 FOXA2 JUND PKNOX1 ATF3 HSD3BP3 GAPDHP27
GH01J119549 Enhancer 0.8 Ensembl ENCODE 0.4 +9.9 9944 0.6 CTCF RAD21 ZNF600 ZNF143 ZNF692 ZNF524 ZNF335 ZNF366 ZNF654 ZNF697 GAPDHP27 HSD3BP3
GH01J119555 Enhancer 0.2 Ensembl 0.7 +3.5 3544 1 ZNF697 PHGDH GAPDHP27 HSD3BP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP27 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP27 Gene

Genomic Locations for GAPDHP27 Gene
chr1:119,558,552-119,559,845
(GRCh38/hg38)
Size:
1,294 bases
Orientation:
Minus strand
chr1:120,101,175-120,102,468
(GRCh37/hg19)
Size:
1,294 bases
Orientation:
Minus strand

Genomic View for GAPDHP27 Gene

Genes around GAPDHP27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP27 Gene

Proteins for GAPDHP27 Gene

Post-translational modifications for GAPDHP27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP27 Gene

Domains & Families for GAPDHP27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP27 Gene

Function for GAPDHP27 Gene

genes like me logo Genes that share phenotypes with GAPDHP27: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP27 Gene

Localization for GAPDHP27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP27 Gene

Pathways & Interactions for GAPDHP27 Gene

PathCards logo

SuperPathways for GAPDHP27 Gene

No Data Available

Interacting Proteins for GAPDHP27 Gene

Gene Ontology (GO) - Biological Process for GAPDHP27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP27 Gene

Drugs & Compounds for GAPDHP27 Gene

No Compound Related Data Available

Transcripts for GAPDHP27 Gene

mRNA/cDNA for GAPDHP27 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP27 Gene

No ASD Table

Relevant External Links for GAPDHP27 Gene

GeneLoc Exon Structure for
GAPDHP27
ECgene alternative splicing isoforms for
GAPDHP27

Expression for GAPDHP27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP27 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP27 Gene

This gene is overexpressed in Brain - Cortex (x5.3).

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP27 Gene:

GAPDHP27
genes like me logo Genes that share expression patterns with GAPDHP27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP27 Gene

Orthologs for GAPDHP27 Gene

Evolution for GAPDHP27 Gene

ENSEMBL:
Gene Tree for GAPDHP27 (if available)
TreeFam:
Gene Tree for GAPDHP27 (if available)

No data available for Orthologs for GAPDHP27 Gene

Paralogs for GAPDHP27 Gene

No data available for Paralogs for GAPDHP27 Gene

Variants for GAPDHP27 Gene

Additional Variant Information for GAPDHP27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP27 Gene

Disorders for GAPDHP27 Gene

No disorders were found for GAPDHP27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP27 Gene

Publications for GAPDHP27 Gene

No publications were found for GAPDHP27 Gene.

No data available for External Links for GAPDHP27 Gene

Products for GAPDHP27 Gene

Sources for GAPDHP27 Gene

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