Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GAPDHP20 Gene

Aliases for GAPDHP20 Gene

  • Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 20 2 3 5

External Ids for GAPDHP20 Gene

Previous GeneCards Identifiers for GAPDHP20 Gene

  • GC01M032868
  • GC01M030982

Summaries for GAPDHP20 Gene

GeneCards Summary for GAPDHP20 Gene

GAPDHP20 (Glyceraldehyde 3 Phosphate Dehydrogenase Pseudogene 20) is a Pseudogene.

Additional gene information for GAPDHP20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP20 Gene

Genomics for GAPDHP20 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP20 Gene

Promoters and enhancers for GAPDHP20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J032404 Enhancer 0.2 ENCODE 600.7 -1.7 -1664 1.3 GAPDHP20 ENSG00000224066 ENSG00000233775 EIF3I TMEM234 DCDC2B FNDC5 SYNC AK2 ENSG00000270850
GH01J032400 Enhancer 0.8 ENCODE 0.7 +2.1 2137 1.1 CC2D1A CTCF TFE3 RAD21 IKZF1 ZBTB8A IKZF2 ZNF512 GATAD2A ZNF143 ENSG00000224066 ENSG00000233775 EIF3I TMEM234 DCDC2B ZBTB8A FNDC5 SYNC GAPDHP20 BSDC1
GH01J032414 Enhancer 1.2 Ensembl ENCODE 0.4 -10.9 -10918 0.6 CC2D1A CTCF CEBPG GTF2F1 CDC5L MYC TRIM24 ZNF644 RAD21 SMARCA4 LRRC37A12P ENSG00000254553 ZBTB8B MARCKSL1 HDAC1 SYNC ENSG00000270850 GAPDHP20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP20 Gene

Genomic Locations for GAPDHP20 Gene
chr1:32,401,899-32,403,183
(GRCh38/hg38)
Size:
1,285 bases
Orientation:
Minus strand
chr1:32,867,501-32,868,784
(GRCh37/hg19)
Size:
1,284 bases
Orientation:
Minus strand

Genomic View for GAPDHP20 Gene

Genes around GAPDHP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP20 Gene

Proteins for GAPDHP20 Gene

Post-translational modifications for GAPDHP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP20 Gene

Domains & Families for GAPDHP20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP20 Gene

Function for GAPDHP20 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP20 Gene

Localization for GAPDHP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP20 Gene

Pathways & Interactions for GAPDHP20 Gene

PathCards logo

SuperPathways for GAPDHP20 Gene

No Data Available

Interacting Proteins for GAPDHP20 Gene

Gene Ontology (GO) - Biological Process for GAPDHP20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP20 Gene

Drugs & Compounds for GAPDHP20 Gene

No Compound Related Data Available

Transcripts for GAPDHP20 Gene

mRNA/cDNA for GAPDHP20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP20 Gene

No ASD Table

Relevant External Links for GAPDHP20 Gene

GeneLoc Exon Structure for
GAPDHP20
ECgene alternative splicing isoforms for
GAPDHP20

Expression for GAPDHP20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP20 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP20 Gene

This gene is overexpressed in Pituitary (x27.2) and Testis (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP20 Gene:

GAPDHP20
genes like me logo Genes that share expression patterns with GAPDHP20: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP20 Gene

Orthologs for GAPDHP20 Gene

Evolution for GAPDHP20 Gene

ENSEMBL:
Gene Tree for GAPDHP20 (if available)
TreeFam:
Gene Tree for GAPDHP20 (if available)

No data available for Orthologs for GAPDHP20 Gene

Paralogs for GAPDHP20 Gene

No data available for Paralogs for GAPDHP20 Gene

Variants for GAPDHP20 Gene

Additional Variant Information for GAPDHP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP20 Gene

Disorders for GAPDHP20 Gene

No disorders were found for GAPDHP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GAPDHP20 Gene

Publications for GAPDHP20 Gene

No publications were found for GAPDHP20 Gene.

Products for GAPDHP20 Gene

Sources for GAPDHP20 Gene

Content
Loading form....