Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GAPDHP15 Gene

Aliases for GAPDHP15 Gene

  • Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 15 2 3 5
  • GAPDH-Lp 3
  • B55C20.4 3
  • GAPDP15 3

External Ids for GAPDHP15 Gene

Previous HGNC Symbols for GAPDHP15 Gene

  • GAPDP15

Previous GeneCards Identifiers for GAPDHP15 Gene

  • GC00U921657
  • GC06M058403
  • GC06M058294
  • GC06M057297

Summaries for GAPDHP15 Gene

GeneCards Summary for GAPDHP15 Gene

GAPDHP15 (Glyceraldehyde-3-Phosphate Dehydrogenase Pseudogene 15) is a Pseudogene.

Additional gene information for GAPDHP15 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAPDHP15 Gene

Genomics for GAPDHP15 Gene

GeneHancer (GH) Regulatory Elements for GAPDHP15 Gene

Promoters and enhancers for GAPDHP15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J057985 Enhancer 0.7 ENCODE 0.4 -17.7 -17658 1.5 NKRF IKZF1 BACH1 IKZF2 TRIM22 PKNOX1 DPF2 ELF1 BMI1 NR2F1 LINC00680 ENSG00000272541 GAPDHP15 LOC101927293 ENSG00000225096 LOC100288628
GH06J057976 Enhancer 0.5 Ensembl 0.4 -7.8 -7755 0.6 CBFA2T2 FOSL1 TCF12 TAL1 CBFA2T3 GAPDHP15 LOC101927293 ENSG00000225096 LOC100288628
GH06J057965 Enhancer 0.2 Ensembl 0.7 +3.1 3137 0.4 LINC00680 GAPDHP15 LOC101927293 ENSG00000225096
GH06J058059 Enhancer 0.5 Ensembl 0.2 -91.0 -90963 0.2 ZNF189 WT1 ZNF660 FEZF1 HLF LOC100288628 GAPDHP15 ENSG00000225096 LOC101927293
GH06J057983 Enhancer 0.2 ENCODE 0.4 -15.5 -15454 1.9 LINC00680 GAPDHP15 LOC101927293 ENSG00000225096 LOC100288628
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GAPDHP15 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GAPDHP15 Gene

Genomic Locations for GAPDHP15 Gene
chr6:57,967,596-57,968,738
(GRCh38/hg38)
Size:
1,143 bases
Orientation:
Minus strand
chr6:58,293,686-58,294,939
(GRCh37/hg19)
Size:
1,254 bases
Orientation:
Minus strand

Genomic View for GAPDHP15 Gene

Genes around GAPDHP15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAPDHP15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAPDHP15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAPDHP15 Gene

Proteins for GAPDHP15 Gene

Post-translational modifications for GAPDHP15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAPDHP15 Gene

Domains & Families for GAPDHP15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAPDHP15 Gene

Function for GAPDHP15 Gene

Phenotypes From GWAS Catalog for GAPDHP15 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GAPDHP15 Gene

Localization for GAPDHP15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GAPDHP15 Gene

Pathways & Interactions for GAPDHP15 Gene

PathCards logo

SuperPathways for GAPDHP15 Gene

No Data Available

Interacting Proteins for GAPDHP15 Gene

Gene Ontology (GO) - Biological Process for GAPDHP15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GAPDHP15 Gene

Drugs & Compounds for GAPDHP15 Gene

No Compound Related Data Available

Transcripts for GAPDHP15 Gene

mRNA/cDNA for GAPDHP15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAPDHP15 Gene

No ASD Table

Relevant External Links for GAPDHP15 Gene

GeneLoc Exon Structure for
GAPDHP15
ECgene alternative splicing isoforms for
GAPDHP15

Expression for GAPDHP15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAPDHP15 Gene

mRNA differential expression in normal tissues according to GTEx for GAPDHP15 Gene

This gene is overexpressed in Nerve - Tibial (x10.2).

NURSA nuclear receptor signaling pathways regulating expression of GAPDHP15 Gene:

GAPDHP15
genes like me logo Genes that share expression patterns with GAPDHP15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAPDHP15 Gene

Orthologs for GAPDHP15 Gene

Evolution for GAPDHP15 Gene

ENSEMBL:
Gene Tree for GAPDHP15 (if available)
TreeFam:
Gene Tree for GAPDHP15 (if available)

No data available for Orthologs for GAPDHP15 Gene

Paralogs for GAPDHP15 Gene

No data available for Paralogs for GAPDHP15 Gene

Variants for GAPDHP15 Gene

Additional Variant Information for GAPDHP15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAPDHP15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GAPDHP15 Gene

Disorders for GAPDHP15 Gene

Additional Disease Information for GAPDHP15

Genetic Association Database
(GAD)

No disorders were found for GAPDHP15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GAPDHP15 Gene

Publications for GAPDHP15 Gene

  1. Common variants at 5q22 associate with pediatric eosinophilic esophagitis. (PMID: 20208534) Rothenberg ME … Hakonarson H (Nature genetics 2010) 45 58
  2. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 45 58

Products for GAPDHP15 Gene

Sources for GAPDHP15 Gene

Content
Loading form....