Free for academic non-profit institutions. Other users need a Commercial license
GALNTL6-AS1 (GALNTL6 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH04J172725 | Enhancer | 0.8 | ENCODE | 250.7 | +0.5 | 509 | 2.6 | CEBPA FOXA1 HOMEZ KDM6A FOXA2 RARA TEAD3 BCL6 CREM FOXP1 | GALNTL6-AS1 piR-42491-170 GALNT7 GALNTL6 | |
GH04J172751 | Enhancer | 0.7 | Ensembl | 0.3 | -24.6 | -24622 | 0.6 | IRF4 TRIM22 CBFB BHLHE40 STAT5A NFATC1 MTA3 BMI1 NR2F1 BACH1 | GALNTL6-AS1 lnc-HMGB2-12 GALNT7 GALNTL6 | |
GH04J172707 | Enhancer | 0.4 | Ensembl | 0.4 | +19.4 | 19377 | 0.2 | PKNOX1 DPF2 EP300 | GALNTL6-AS1 piR-42491-170 GALNT7 GALNTL6 | |
GH04J172708 | Enhancer | 0.3 | Ensembl | 0.4 | +18.6 | 18577 | 0.6 | CTBP1 RFX1 | GALNTL6-AS1 piR-42491-170 GALNT7 GALNTL6 | |
GH04J172757 | Enhancer | 0.4 | Ensembl | 0.3 | -32.1 | -32146 | 1.6 | CEBPB EP300 SPI1 FOS | GALNTL6-AS1 lnc-HMGB2-12 GALNT7 GALNTL6 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS00007E418F_9606 | lncRNA | 2106 | 1 |
RefSeq: NR_125894, |
URS00007E4D8D_9606 | lncRNA | 629 | 1 |
RefSeq: NR_125895, |
URS00008B225F_9606 | lncRNA | 2110 | 3 |
LncBook: HSALNT0080811, LNCipedia: lnc-HMGB2-13:1, NONCODE: NONHSAT099210.2, |
URS00009AD2CF_9606 | lncRNA | 634 | 3 |
LncBook: HSALNT0080810, LNCipedia: lnc-HMGB2-13:4, NONCODE: NONHSAT200684.1, |
URS0001BD673B_9606 | lncRNA | 2107 | 1 |
LncBook: HSALNT0080811, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv1042e214 | CNV | gain | 21293372 |
esv3603200 | CNV | loss | 21293372 |
No disorders were found for GALNTL6-AS1 Gene.