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This gene is located upstream of XIST, within the X-inactivation center (XIC). It produces a spliced long non-coding RNA that is thought to positively regulate the expression of XIST, which is essential for the initiation and spread of X-inactivation. [provided by RefSeq, May 2015]
FTX (FTX Transcript, XIST Regulator) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with FTX include Glioma and Renal Cell Carcinoma, Nonpapillary.
GO ID | Qualified GO term | Evidence | PubMed IDs |
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GO:0010628 | positive regulation of gene expression | IEA | -- |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000043C800_9606 | lncRNA | 2356 | 3 |
HGNC: 37190, RefSeq: NR_028379, LNCipedia: FTX:2, |
URS0000A7A257_9606 | lncRNA | 1367 | 3 |
Ensembl: ENST00000638985 (view in UCSC) , LncBook: HSALNT0283725, LNCipedia: FTX:51, |
URS00005595C6_9606 | lncRNA | 905 | 3 |
Ensembl: ENST00000603952 (view in UCSC) , LNCipedia: FTX:58, NONCODE: NONHSAT137585.2, |
URS00001F4683_9606 | lncRNA | 574 | 3 |
Ensembl: ENST00000602576 (view in UCSC) , LncBook: HSALNT0283753, LNCipedia: FTX:10, |
URS0000A9D490_9606 | lncRNA | 12267 | 2 |
Ensembl: ENST00000638437 (view in UCSC) , LNCipedia: FTX:54, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv2740225 | CNV | deletion | 23290073 |
esv2740226 | CNV | deletion | 23290073 |
esv2740227 | CNV | deletion | 23290073 |
Disorder | Aliases | PubMed IDs |
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glioma |
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renal cell carcinoma, nonpapillary |
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hepatocellular carcinoma |
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colorectal cancer |
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retinitis pigmentosa |
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