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Aliases for FTOP1 Gene

Aliases for FTOP1 Gene

  • Fat Mass And Obesity Associated Pseudogene 1 2 3 5

External Ids for FTOP1 Gene

Previous GeneCards Identifiers for FTOP1 Gene

  • GC02M043026

Summaries for FTOP1 Gene

GeneCards Summary for FTOP1 Gene

FTOP1 (Fat Mass And Obesity Associated Pseudogene 1) is a Pseudogene.

Additional gene information for FTOP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FTOP1 Gene

Genomics for FTOP1 Gene

GeneHancer (GH) Regulatory Elements for FTOP1 Gene

Promoters and enhancers for FTOP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I042791 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5.9 +4.5 4494 5.5 MLX ZFP64 ARID4B DMAP1 IRF4 YY1 SLC30A9 ZNF143 PAF1 SP5 HAAO GC02P042792 EML4 FTOP1 GC02P042660 MTA3
GH02I042770 Enhancer 0.9 Ensembl ENCODE 9.4 +27.8 27811 0.6 HDAC1 CTCF USF1 RB1 ARID4B MAX EBF1 RAD21 CC2D1A CTBP1 OXER1 KCNG3 MTA3 FTOP1 HAAO GC02P042792 GC02P042660
GH02I042956 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 5.3 -162.5 -162503 9.1 PKNOX1 FOXA2 ARID4B DMAP1 YY1 FOS RXRA SP5 REST NFIL3 FTOP1 THADA GC02M042943 ENSG00000224739 GC02P042853 LOC105374567 GC02P042660
GH02I042905 Enhancer 1.3 Ensembl ENCODE dbSUPER 5.8 -108.5 -108470 4 PKNOX1 FEZF1 ZNF2 ZNF48 GLIS2 ZNF213 RUNX3 SP5 TSHZ1 ZNF592 ZFP36L2 ENSG00000234936 OXER1 HAAO FTOP1 COX7A2L LOC105374568 PIR35642 GC02P042853 LOC105374567
GH02I042859 Enhancer 1 Ensembl ENCODE 5.4 -60.5 -60519 0.3 ELF3 ARNT ARID4B BATF ZSCAN9 RAD21 ARID2 ZNF143 RCOR1 THAP11 FTOP1 GC02P042853 PIR35642 LOC105374567 GC02P042660
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FTOP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FTOP1 Gene

Genomic Locations for FTOP1 Gene
chr2:42,797,225-42,798,712
(GRCh38/hg38)
Size:
1,488 bases
Orientation:
Minus strand
chr2:43,024,365-43,025,852
(GRCh37/hg19)

Genomic View for FTOP1 Gene

Genes around FTOP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FTOP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FTOP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FTOP1 Gene

Proteins for FTOP1 Gene

Post-translational modifications for FTOP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FTOP1 Gene

Domains & Families for FTOP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FTOP1 Gene

Function for FTOP1 Gene

Phenotypes From GWAS Catalog for FTOP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FTOP1 Gene

Localization for FTOP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FTOP1 Gene

Pathways & Interactions for FTOP1 Gene

SuperPathways for FTOP1 Gene

No Data Available

Interacting Proteins for FTOP1 Gene

Gene Ontology (GO) - Biological Process for FTOP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FTOP1 Gene

Drugs & Compounds for FTOP1 Gene

No Compound Related Data Available

Transcripts for FTOP1 Gene

mRNA/cDNA for FTOP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FTOP1 Gene

No ASD Table

Relevant External Links for FTOP1 Gene

GeneLoc Exon Structure for
FTOP1
ECgene alternative splicing isoforms for
FTOP1

Expression for FTOP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FTOP1 Gene

mRNA differential expression in normal tissues according to GTEx for FTOP1 Gene

This gene is overexpressed in Liver (x5.1).

NURSA nuclear receptor signaling pathways regulating expression of FTOP1 Gene:

FTOP1
genes like me logo Genes that share expression patterns with FTOP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FTOP1 Gene

Orthologs for FTOP1 Gene

Evolution for FTOP1 Gene

ENSEMBL:
Gene Tree for FTOP1 (if available)
TreeFam:
Gene Tree for FTOP1 (if available)

No data available for Orthologs for FTOP1 Gene

Paralogs for FTOP1 Gene

No data available for Paralogs for FTOP1 Gene

Variants for FTOP1 Gene

Additional Variant Information for FTOP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FTOP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FTOP1 Gene

Disorders for FTOP1 Gene

No disorders were found for FTOP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FTOP1 Gene

Publications for FTOP1 Gene

No publications were found for FTOP1 Gene.

Products for FTOP1 Gene

Sources for FTOP1 Gene

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