Aliases for FTLP17 Gene

Aliases for FTLP17 Gene

  • Ferritin Light Chain Pseudogene 17 2 3 5
  • Ferritin, Light Polypeptide Pseudogene 17 2 3
  • FTLP17 5

External Ids for FTLP17 Gene

Previous GeneCards Identifiers for FTLP17 Gene

  • GC01M104696
  • GC01M102647

Summaries for FTLP17 Gene

GeneCards Summary for FTLP17 Gene

FTLP17 (Ferritin Light Chain Pseudogene 17) is a Pseudogene.

Additional gene information for FTLP17 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FTLP17 Gene

Genomics for FTLP17 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FTLP17 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J104153 Promoter 0.3 Ensembl 250.7 +0.2 236 0.4 FTLP17 RF00875-001 piR-42812 HSALNG0005655 LOC100129138 AMY1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FTLP17 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FTLP17 Gene

Latest Assembly
chr1:104,153,306-104,154,037
(GRCh38/hg38)
Size:
732 bases
Orientation:
Minus strand

Previous Assembly
chr1:104,695,951-104,696,659
(GRCh37/hg19 by Entrez Gene)
Size:
709 bases
Orientation:
Minus strand

chr1:104,695,928-104,696,452
(GRCh37/hg19 by Ensembl)
Size:
525 bases
Orientation:
Minus strand

Genomic View for FTLP17 Gene

Genes around FTLP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FTLP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FTLP17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FTLP17 Gene

Proteins for FTLP17 Gene

Post-translational modifications for FTLP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FTLP17 Gene

Domains & Families for FTLP17 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FTLP17 Gene

Function for FTLP17 Gene

Phenotypes From GWAS Catalog for FTLP17 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FTLP17 Gene

Localization for FTLP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FTLP17 Gene

Pathways & Interactions for FTLP17 Gene

PathCards logo

SuperPathways for FTLP17 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FTLP17 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FTLP17 Gene

Drugs & Compounds for FTLP17 Gene

No Compound Related Data Available

Transcripts for FTLP17 Gene

mRNA/cDNA for FTLP17 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FTLP17 Gene

No ASD Table

Relevant External Links for FTLP17 Gene

GeneLoc Exon Structure for
FTLP17

Expression for FTLP17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FTLP17 Gene

genes like me logo Genes that share expression patterns with FTLP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FTLP17 Gene

Orthologs for FTLP17 Gene

Evolution for FTLP17 Gene

ENSEMBL:
Gene Tree for FTLP17 (if available)
TreeFam:
Gene Tree for FTLP17 (if available)
Alliance of Genome Resources:
Additional Orthologs for FTLP17

No data available for Orthologs for FTLP17 Gene

Paralogs for FTLP17 Gene

No data available for Paralogs for FTLP17 Gene

Variants for FTLP17 Gene

Additional Variant Information for FTLP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FTLP17
Leiden Open Variation Database (LOVD)
FTLP17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FTLP17 Gene

Disorders for FTLP17 Gene

No disorders were found for FTLP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FTLP17 Gene

Publications for FTLP17 Gene

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 40
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 40

No data available for Mastermind for FTLP17 Gene

Products for FTLP17 Gene

Sources for FTLP17 Gene