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Aliases for FRY-AS1 Gene

Subcategory (RNA class) for FRY-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FRY-AS1 Gene

  • FRY Antisense RNA 1 2 3 5
  • FRY Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FRY-AS1 Gene

Previous GeneCards Identifiers for FRY-AS1 Gene

  • GC13M032600
  • GC13M032604
  • GC13M032130
  • GC13M032133
  • GC13M032137
  • GC13M032138
  • GC13M032140
  • GC13M032145
  • GC13M032565

Summaries for FRY-AS1 Gene

GeneCards Summary for FRY-AS1 Gene

FRY-AS1 (FRY Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FRY-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRY-AS1 Gene

Genomics for FRY-AS1 Gene

GeneHancer (GH) Regulatory Elements for FRY-AS1 Gene

Promoters and enhancers for FRY-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I032030 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 550.8 +0.2 215 2 FOXA2 ARID4B SIN3A DMAP1 ZNF48 YY1 GLIS2 FOS RUNX3 SP3 FRY FRY-AS1
GH13I031981 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.1 +49.2 49203 1.2 FOXA2 NFIB JUN ZNF644 YY1 POLR2A SCRT2 FOSL2 FOS CHD2 FRY FRY-AS1 N4BP2L1 LINC01073 ENSG00000278732
GH13I032142 Enhancer 1.1 Ensembl ENCODE 11.2 -111.4 -111403 1.1 FOXA2 MLX ZFP64 ARID4B FEZF1 DMAP1 ETS1 NFYC MXD4 PPARG FRY FRY-AS1 GC13P032060 GC13P032297
GH13I032124 Enhancer 1 FANTOM5 Ensembl ENCODE 11.2 -94.1 -94115 2.1 POLR2A CEBPB RCOR1 CUX1 EP300 TCF7L2 FRY-AS1 FRY N4BP2L2 BRCA2 N4BP2L1 GC13P032060 GC13P032297
GH13I032080 Enhancer 1 ENCODE dbSUPER 10.8 -49.1 -49098 1 ELF3 FOXA2 ARID4B THRB RARA CREM THAP11 MIXL1 HMG20B PPARG FRY FRY-AS1 GC13P032060 GC13P032297
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FRY-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FRY-AS1 Gene

Genomic Locations for FRY-AS1 Gene
chr13:32,024,046-32,031,639
(GRCh38/hg38)
Size:
7,594 bases
Orientation:
Minus strand
chr13:32,598,183-32,605,780
(GRCh37/hg19)

Genomic View for FRY-AS1 Gene

Genes around FRY-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRY-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRY-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRY-AS1 Gene

Proteins for FRY-AS1 Gene

Post-translational modifications for FRY-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRY-AS1 Gene

Domains & Families for FRY-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FRY-AS1 Gene

Function for FRY-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRY-AS1 Gene

Localization for FRY-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FRY-AS1 Gene

Pathways & Interactions for FRY-AS1 Gene

SuperPathways for FRY-AS1 Gene

No Data Available

Interacting Proteins for FRY-AS1 Gene

Gene Ontology (GO) - Biological Process for FRY-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRY-AS1 Gene

Drugs & Compounds for FRY-AS1 Gene

No Compound Related Data Available

Transcripts for FRY-AS1 Gene

mRNA/cDNA for FRY-AS1 Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FRY-AS1 Gene

FRY antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FRY-AS1 Gene

No ASD Table

Relevant External Links for FRY-AS1 Gene

GeneLoc Exon Structure for
FRY-AS1
ECgene alternative splicing isoforms for
FRY-AS1

Expression for FRY-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FRY-AS1 Gene

SOURCE GeneReport for Unigene cluster for FRY-AS1 Gene:

Hs.536364
genes like me logo Genes that share expression patterns with FRY-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRY-AS1 Gene

Orthologs for FRY-AS1 Gene

Evolution for FRY-AS1 Gene

ENSEMBL:
Gene Tree for FRY-AS1 (if available)
TreeFam:
Gene Tree for FRY-AS1 (if available)

No data available for Orthologs for FRY-AS1 Gene

Paralogs for FRY-AS1 Gene

No data available for Paralogs for FRY-AS1 Gene

Variants for FRY-AS1 Gene

Sequence variations from dbSNP and Humsavar for FRY-AS1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000086822 -- 32,025,910(-) C/T non_coding_transcript_variant
rs1000148662 -- 32,028,973(-) C/T intron_variant
rs1000301078 -- 32,032,730(-) T/C upstream_transcript_variant
rs1000431639 -- 32,032,492(-) A/C upstream_transcript_variant
rs1001038262 -- 32,030,933(-) T/G intron_variant

Additional Variant Information for FRY-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRY-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FRY-AS1 Gene

Disorders for FRY-AS1 Gene

Additional Disease Information for FRY-AS1

No disorders were found for FRY-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRY-AS1 Gene

Publications for FRY-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FRY-AS1 Gene

Sources for FRY-AS1 Gene

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