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Aliases for FRG2KP Gene

Aliases for FRG2KP Gene

  • FSHD Region Gene 2 Family Member K, Pseudogene 2 3 5

External Ids for FRG2KP Gene

Summaries for FRG2KP Gene

GeneCards Summary for FRG2KP Gene

FRG2KP (FSHD Region Gene 2 Family Member K, Pseudogene) is a Pseudogene.

Additional gene information for FRG2KP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRG2KP Gene

Genomics for FRG2KP Gene

GeneHancer (GH) Regulatory Elements for FRG2KP Gene

Promoters and enhancers for FRG2KP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I031569 Promoter 0.6 Ensembl 0.3 +27.5 27486 0.4 EZH2 YBX3P1 ARMC5 ENSG00000260740 ENSG00000278885 FRG2KP
GH16I031568 Enhancer 0.4 Ensembl 0.3 +28.0 27986 0.2 CTCF EZH2 ENSG00000278885 YBX3P1 ARMC5 ENSG00000260740 FRG2KP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FRG2KP on UCSC Golden Path with GeneCards custom track

Genomic Locations for FRG2KP Gene

Genomic Locations for FRG2KP Gene
chr16:31,562,665-31,596,887
(GRCh38/hg38)
Size:
34,223 bases
Orientation:
Minus strand
chr16:31,574,403-31,579,037
(GRCh37/hg19)

Genomic View for FRG2KP Gene

Genes around FRG2KP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRG2KP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRG2KP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRG2KP Gene

Proteins for FRG2KP Gene

Post-translational modifications for FRG2KP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRG2KP Gene

Domains & Families for FRG2KP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FRG2KP Gene

Function for FRG2KP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRG2KP Gene

Localization for FRG2KP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FRG2KP Gene

Pathways & Interactions for FRG2KP Gene

SuperPathways for FRG2KP Gene

No Data Available

Interacting Proteins for FRG2KP Gene

Gene Ontology (GO) - Biological Process for FRG2KP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRG2KP Gene

Drugs & Compounds for FRG2KP Gene

No Compound Related Data Available

Transcripts for FRG2KP Gene

mRNA/cDNA for FRG2KP Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FRG2KP Gene

No ASD Table

Relevant External Links for FRG2KP Gene

GeneLoc Exon Structure for
FRG2KP
ECgene alternative splicing isoforms for
FRG2KP

Expression for FRG2KP Gene

NURSA nuclear receptor signaling pathways regulating expression of FRG2KP Gene:

FRG2KP
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRG2KP Gene

Orthologs for FRG2KP Gene

Evolution for FRG2KP Gene

ENSEMBL:
Gene Tree for FRG2KP (if available)
TreeFam:
Gene Tree for FRG2KP (if available)

No data available for Orthologs for FRG2KP Gene

Paralogs for FRG2KP Gene

No data available for Paralogs for FRG2KP Gene

Variants for FRG2KP Gene

Sequence variations from dbSNP and Humsavar for FRG2KP Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000978677 -- 31,568,373(-) G/T upstream_transcript_variant
rs1001641826 -- 31,567,501(-) G/T non_coding_transcript_variant
rs1001880738 -- 31,568,136(-) C/A upstream_transcript_variant
rs1001980392 -- 31,568,782(-) G/A upstream_transcript_variant
rs1002080407 -- 31,567,830(-) C/T upstream_transcript_variant

Additional Variant Information for FRG2KP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRG2KP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FRG2KP Gene

Disorders for FRG2KP Gene

Additional Disease Information for FRG2KP

No disorders were found for FRG2KP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRG2KP Gene

Publications for FRG2KP Gene

No publications were found for FRG2KP Gene.

Products for FRG2KP Gene

Sources for FRG2KP Gene

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