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Aliases for FRG2KP Gene

Aliases for FRG2KP Gene

  • FSHD Region Gene 2 Family Member K, Pseudogene 2 3 5

External Ids for FRG2KP Gene

Summaries for FRG2KP Gene

GeneCards Summary for FRG2KP Gene

FRG2KP (FSHD Region Gene 2 Family Member K, Pseudogene) is a Pseudogene.

Additional gene information for FRG2KP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRG2KP Gene

Genomics for FRG2KP Gene

GeneHancer (GH) Regulatory Elements for FRG2KP Gene

Promoters and enhancers for FRG2KP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J031116 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 +478.5 478475 3.9 HDGF PKNOX1 SMAD1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 KAT8 ENSG00000262766 VKORC1 SRCAP SETD1A NPIPB13 ENSG00000260267 SMG1P5 STX4 YBX3P1
GH16J030956 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.3 +639.0 638996 3.4 CLOCK FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF548 ZNF263 SP3 SETD1A ENSG00000275263 SRCAP INO80E ZNF764 ENSG00000260267 RNF40 ZNF747 SMG1P5 KAT8
GH16J031071 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.3 +523.2 523247 5 CLOCK MLX ZFP64 DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF646 ZNF668 PIR38332 PIR37153 SETD1A SRCAP ZNF785 KAT8 RNF40 FBRS
GH16J030649 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.3 +945.6 945637 3.6 FEZF1 DMAP1 YY1 E2F8 ZNF416 ZNF143 ZNF548 SP3 NFYC MEF2D PRR14 SETD1A ENSG00000260267 SRCAP SMG1P5 ENSG00000260304 BCL7C ZNF747 FUS INO80E
GH16J031507 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 +88.1 88139 3.3 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B ZNF213 C16orf58 GC16P031508 ENSG00000260625 PIR61516 RNF40 ENSG00000260267 LINC02190 SETD1A ENSG00000261648 VN1R64P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FRG2KP on UCSC Golden Path with GeneCards custom track

Genomic Locations for FRG2KP Gene

Genomic Locations for FRG2KP Gene
chr16:31,562,665-31,596,887
(GRCh38/hg38)
Size:
34,223 bases
Orientation:
Minus strand

Genomic View for FRG2KP Gene

Genes around FRG2KP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRG2KP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRG2KP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRG2KP Gene

Function for FRG2KP Gene

Phenotypes From GWAS Catalog for FRG2KP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRG2KP Gene

Localization for FRG2KP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FRG2KP Gene

Pathways & Interactions for FRG2KP Gene

SuperPathways for FRG2KP Gene

No Data Available

Interacting Proteins for FRG2KP Gene

Gene Ontology (GO) - Biological Process for FRG2KP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRG2KP Gene

Drugs & Compounds for FRG2KP Gene

No Compound Related Data Available

Transcripts for FRG2KP Gene

mRNA/cDNA for FRG2KP Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FRG2KP Gene

No ASD Table

Relevant External Links for FRG2KP Gene

GeneLoc Exon Structure for
FRG2KP
ECgene alternative splicing isoforms for
FRG2KP

Expression for FRG2KP Gene

NURSA nuclear receptor signaling pathways regulating expression of FRG2KP Gene:

FRG2KP
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRG2KP Gene

Orthologs for FRG2KP Gene

Evolution for FRG2KP Gene

ENSEMBL:
Gene Tree for FRG2KP (if available)
TreeFam:
Gene Tree for FRG2KP (if available)

No data available for Orthologs for FRG2KP Gene

Paralogs for FRG2KP Gene

No data available for Paralogs for FRG2KP Gene

Variants for FRG2KP Gene

Sequence variations from dbSNP and Humsavar for FRG2KP Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000978677 -- 31,568,373(-) G/T upstream_transcript_variant
rs1001641826 -- 31,567,501(-) G/T non_coding_transcript_variant
rs1001880738 -- 31,568,136(-) C/A upstream_transcript_variant
rs1001980392 -- 31,568,782(-) G/A upstream_transcript_variant
rs1002080407 -- 31,567,830(-) C/T upstream_transcript_variant

Additional Variant Information for FRG2KP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRG2KP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FRG2KP Gene

Disorders for FRG2KP Gene

Additional Disease Information for FRG2KP

No disorders were found for FRG2KP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRG2KP Gene

Publications for FRG2KP Gene

No publications were found for FRG2KP Gene.

Products for FRG2KP Gene

Sources for FRG2KP Gene

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