Aliases for FRG2DP Gene

Aliases for FRG2DP Gene

  • FSHD Region Gene 2 Family Member D, Pseudogene 2 3 5
  • FSHD Region Gene 2 Family, Member D, Pseudogene 2
  • FSHD Region Gene 2 Family, Member C Pseudogene 3
  • FRG2DP 5

External Ids for FRG2DP Gene

Summaries for FRG2DP Gene

GeneCards Summary for FRG2DP Gene

FRG2DP (FSHD Region Gene 2 Family Member D, Pseudogene) is a Pseudogene.

Additional gene information for FRG2DP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FRG2DP Gene

Genomics for FRG2DP Gene

Genomic Locations for FRG2DP Gene

Latest Assembly
chr16:35,477,414-35,480,596
(GRCh38/hg38)
Size:
3,183 bases
Orientation:
Minus strand

Previous Assembly
chr16:34,711,785-34,714,967
(GRCh37/hg19 by Entrez Gene)
Size:
3,183 bases
Orientation:
Minus strand

chr16:34,711,785-34,714,852
(GRCh37/hg19 by Ensembl)
Size:
3,068 bases
Orientation:
Minus strand

Genomic View for FRG2DP Gene

Genes around FRG2DP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRG2DP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRG2DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRG2DP Gene

No data available for GeneHancer (GH) Regulatory Elements for FRG2DP Gene

Proteins for FRG2DP Gene

Post-translational modifications for FRG2DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRG2DP Gene

Domains & Families for FRG2DP Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FRG2DP Gene

Function for FRG2DP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRG2DP Gene

Localization for FRG2DP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FRG2DP Gene

Pathways & Interactions for FRG2DP Gene

PathCards logo

SuperPathways for FRG2DP Gene

No Data Available

Gene Ontology (GO) - Biological Process for FRG2DP Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FRG2DP Gene

Drugs & Compounds for FRG2DP Gene

No Compound Related Data Available

Transcripts for FRG2DP Gene

mRNA/cDNA for FRG2DP Gene

1 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FRG2DP Gene

No ASD Table

Relevant External Links for FRG2DP Gene

GeneLoc Exon Structure for
FRG2DP

Expression for FRG2DP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FRG2DP Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for FRG2DP

genes like me logo Genes that share expression patterns with FRG2DP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRG2DP Gene

Orthologs for FRG2DP Gene

Evolution for FRG2DP Gene

ENSEMBL:
Gene Tree for FRG2DP (if available)
TreeFam:
Gene Tree for FRG2DP (if available)
Alliance of Genome Resources:
Additional Orthologs for FRG2DP

No data available for Orthologs for FRG2DP Gene

Paralogs for FRG2DP Gene

No data available for Paralogs for FRG2DP Gene

Variants for FRG2DP Gene

Structural Variations from Database of Genomic Variants (DGV) for FRG2DP Gene

Variant ID Type Subtype PubMed ID
dgv117e55 CNV gain 17911159
dgv119e55 CNV gain 17911159
dgv1602e59 CNV duplication 20981092
dgv165n21 CNV gain 19592680
dgv2960n100 CNV gain 25217958
dgv2962n100 CNV gain 25217958
dgv2965n100 CNV gain 25217958
dgv2966n100 CNV gain 25217958
dgv2968n100 CNV gain 25217958
dgv2972n100 CNV gain 25217958
dgv2973n100 CNV gain 25217958
dgv2974n100 CNV gain 25217958
dgv4n1 CNV deletion 15895083
dgv5084n54 CNV gain 21841781
dgv51e203 CNV gain 21179565
dgv824e212 CNV gain 25503493
esv22460 CNV gain+loss 19812545
esv2421698 CNV duplication 20811451
esv2668244 CNV deletion 23128226
esv2751556 CNV gain 17911159
esv2751557 CNV gain 17911159
esv33073 CNV loss 17666407
esv3410645 OTHER inversion 20981092
esv3638499 CNV loss 21293372
esv3638500 CNV gain 21293372
esv3638504 CNV loss 21293372
esv995712 CNV loss 20482838
nsv1056617 CNV gain 25217958
nsv428326 CNV loss 18775914
nsv442722 CNV gain 18776908
nsv499817 OTHER inversion 21111241
nsv514804 CNV gain 21397061
nsv516385 CNV gain 19592680
nsv527583 CNV gain 19592680
nsv572385 CNV gain 21841781
nsv572386 CNV gain 21841781
nsv7283 OTHER inversion 18451855
nsv819792 CNV loss 19587683
nsv820561 CNV duplication 20802225
nsv833214 CNV gain 17160897
nsv9441 CNV loss 18304495
nsv984329 CNV duplication 23825009

Additional Variant Information for FRG2DP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRG2DP
Leiden Open Variation Database (LOVD)
FRG2DP

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for FRG2DP Gene

Disorders for FRG2DP Gene

Additional Disease Information for FRG2DP

No disorders were found for FRG2DP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRG2DP Gene

Publications for FRG2DP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3

No data available for Mastermind for FRG2DP Gene

Products for FRG2DP Gene

Sources for FRG2DP Gene