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Aliases for FREM2-AS1 Gene

Subcategory (RNA class) for FREM2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FREM2-AS1 Gene

  • FREM2 Antisense RNA 1 2 3 5
  • FREM2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FREM2-AS1 Gene

Previous GeneCards Identifiers for FREM2-AS1 Gene

  • GC00U933492
  • GC13M039396

Summaries for FREM2-AS1 Gene

GeneCards Summary for FREM2-AS1 Gene

FREM2-AS1 (FREM2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FREM2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FREM2-AS1 Gene

Genomics for FREM2-AS1 Gene

GeneHancer (GH) Regulatory Elements for FREM2-AS1 Gene

Promoters and enhancers for FREM2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I038878 Enhancer 0.4 ENCODE 10.6 -48.4 -48358 1.8 HNF4A MAFK NR2F2 GC13M038877 FREM2-AS1 GC13M038879 FREM2
GH13I038735 Enhancer 0.3 ENCODE 9.9 +95.0 95016 0.2 GATA3 FREM2-AS1 GC13M038666 FREM2
GH13I038804 Enhancer 0.2 ENCODE 11.1 +26.1 26076 0.2 RNU6-56P FREM2-AS1 FREM2
GH13I038783 Enhancer 0.2 ENCODE 10.9 +46.4 46425 0.9 FREM2-AS1 RNU6-56P FREM2
GH13I038786 Enhancer 0.2 ENCODE 10.9 +45.6 45636 0.2 FREM2-AS1 RNU6-56P FREM2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FREM2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FREM2-AS1 Gene

Genomic Locations for FREM2-AS1 Gene
chr13:38,821,798-38,830,835
(GRCh38/hg38)
Size:
9,038 bases
Orientation:
Minus strand
chr13:39,395,935-39,401,707
(GRCh37/hg19)

Genomic View for FREM2-AS1 Gene

Genes around FREM2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FREM2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FREM2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FREM2-AS1 Gene

Proteins for FREM2-AS1 Gene

Post-translational modifications for FREM2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FREM2-AS1 Gene

Domains & Families for FREM2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FREM2-AS1 Gene

Function for FREM2-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FREM2-AS1 Gene

Localization for FREM2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FREM2-AS1 Gene

Pathways & Interactions for FREM2-AS1 Gene

SuperPathways for FREM2-AS1 Gene

No Data Available

Interacting Proteins for FREM2-AS1 Gene

Gene Ontology (GO) - Biological Process for FREM2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FREM2-AS1 Gene

Drugs & Compounds for FREM2-AS1 Gene

No Compound Related Data Available

Transcripts for FREM2-AS1 Gene

mRNA/cDNA for FREM2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FREM2-AS1 Gene

No ASD Table

Relevant External Links for FREM2-AS1 Gene

GeneLoc Exon Structure for
FREM2-AS1
ECgene alternative splicing isoforms for
FREM2-AS1

Expression for FREM2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FREM2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FREM2-AS1 Gene

This gene is overexpressed in Pancreas (x51.4).
genes like me logo Genes that share expression patterns with FREM2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FREM2-AS1 Gene

Orthologs for FREM2-AS1 Gene

Evolution for FREM2-AS1 Gene

ENSEMBL:
Gene Tree for FREM2-AS1 (if available)
TreeFam:
Gene Tree for FREM2-AS1 (if available)

No data available for Orthologs for FREM2-AS1 Gene

Paralogs for FREM2-AS1 Gene

No data available for Paralogs for FREM2-AS1 Gene

Variants for FREM2-AS1 Gene

Sequence variations from dbSNP and Humsavar for FREM2-AS1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000258144 -- 38,830,760(-) G/A genic_upstream_transcript_variant, non_coding_transcript_variant
rs1000319122 -- 38,824,825(-) C/T intron_variant
rs1000646976 -- 38,826,329(-) G/A intron_variant
rs1000663446 -- 38,825,993(-) T/G intron_variant
rs1000991846 -- 38,831,660(-) A/C/G upstream_transcript_variant

Additional Variant Information for FREM2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FREM2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FREM2-AS1 Gene

Disorders for FREM2-AS1 Gene

Additional Disease Information for FREM2-AS1

No disorders were found for FREM2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FREM2-AS1 Gene

Publications for FREM2-AS1 Gene

No publications were found for FREM2-AS1 Gene.

Products for FREM2-AS1 Gene

Sources for FREM2-AS1 Gene

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