Aliases for FOXN3-AS1 Gene

Subcategory (RNA class) for FOXN3-AS1 Gene


Number of RNA Genes sources:

3 / 14

Aliases for FOXN3-AS1 Gene

  • FOXN3 Antisense RNA 1 2 3 5
  • FOXN3 Antisense RNA 1 (Non-Protein Coding) 2 3
  • FOXN3-AS1 2 168
  • HSALNG0103087 167
  • NONHSAG015675 92

External Ids for FOXN3-AS1 Gene

Previous GeneCards Identifiers for FOXN3-AS1 Gene

  • GC14P089883

Summaries for FOXN3-AS1 Gene

GeneCards Summary for FOXN3-AS1 Gene

FOXN3-AS1 (FOXN3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for FOXN3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FOXN3-AS1 Gene

Genomics for FOXN3-AS1 Gene

GeneHancer (GH) Regulatory Elements for FOXN3-AS1 Gene

Promoters and enhancers for FOXN3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FOXN3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FOXN3-AS1 Gene

Genomic Locations for FOXN3-AS1 Gene
2,475 bases
Plus strand
2,440 bases
Plus strand

Genomic View for FOXN3-AS1 Gene

Genes around FOXN3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FOXN3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FOXN3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FOXN3-AS1 Gene

Proteins for FOXN3-AS1 Gene

Post-translational modifications for FOXN3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FOXN3-AS1 Gene

Domains & Families for FOXN3-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FOXN3-AS1 Gene

Function for FOXN3-AS1 Gene

Phenotypes From GWAS Catalog for FOXN3-AS1 Gene

Phenotypes for FOXN3-AS1 Gene

genes like me logo Genes that share phenotypes with FOXN3-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FOXN3-AS1 Gene

Localization for FOXN3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FOXN3-AS1 Gene

Pathways & Interactions for FOXN3-AS1 Gene

PathCards logo

SuperPathways for FOXN3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FOXN3-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FOXN3-AS1 Gene

Drugs & Compounds for FOXN3-AS1 Gene

No Compound Related Data Available

Transcripts for FOXN3-AS1 Gene

mRNA/cDNA for FOXN3-AS1 Gene

4 RNACentral transcripts :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
3 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for FOXN3-AS1 Gene

No ASD Table

Relevant External Links for FOXN3-AS1 Gene

GeneLoc Exon Structure for

Expression for FOXN3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FOXN3-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for FOXN3-AS1

SOURCE GeneReport for Unigene cluster for FOXN3-AS1 Gene:

genes like me logo Genes that share expression patterns with FOXN3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FOXN3-AS1 Gene

Orthologs for FOXN3-AS1 Gene

Evolution for FOXN3-AS1 Gene

Gene Tree for FOXN3-AS1 (if available)
Gene Tree for FOXN3-AS1 (if available)

No data available for Orthologs for FOXN3-AS1 Gene

Paralogs for FOXN3-AS1 Gene

No data available for Paralogs for FOXN3-AS1 Gene

Variants for FOXN3-AS1 Gene

Additional dbSNP identifiers (rs#s) for FOXN3-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for FOXN3-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1120n106 CNV deletion 24896259
esv27509 CNV loss 19812545
esv3635294 CNV gain 21293372
nsv1069811 CNV deletion 25765185
nsv832852 CNV gain 17160897

Additional Variant Information for FOXN3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for FOXN3-AS1 Gene

Disorders for FOXN3-AS1 Gene

Additional Disease Information for FOXN3-AS1

No disorders were found for FOXN3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FOXN3-AS1 Gene

Publications for FOXN3-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for FOXN3-AS1 Gene

Sources for FOXN3-AS1 Gene