Aliases for FMO9P Gene

Aliases for FMO9P Gene

  • Flavin Containing Dimethylaniline Monoxygenase 9, Pseudogene 2 3 5
  • Flavin Containing Monooxygenase 9, Pseudogene 2 3
  • RP11-45J16.2 2 3
  • FMO9P 5

External Ids for FMO9P Gene

Previous GeneCards Identifiers for FMO9P Gene

  • GC00U921653
  • GC01P164840
  • GC01P137820

Summaries for FMO9P Gene

GeneCards Summary for FMO9P Gene

FMO9P (Flavin Containing Dimethylaniline Monoxygenase 9, Pseudogene) is a Pseudogene.

Additional gene information for FMO9P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FMO9P Gene

Genomics for FMO9P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FMO9P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J166585 Enhancer 0.9 ENCODE 7 -18.6 -18602 0.6 LEF1 IKZF1 JUND DDX20 MTA2 PKNOX1 ZNF24 MTA1 DPF2 HDAC1 DUTP6 FMO9P FMO8P lnc-POGK-4 piR-49713-002 POGK FAM78B
GH01J166673 Enhancer 0.5 Ensembl 4.4 +70.0 69985 0.6 IKZF1 HDAC1 HDAC2 GABPA SPI1 KDM1A DUTP6 FMO9P lnc-POGK-2 lnc-TADA1-3 FMO10P POGK FAM78B
GH01J167111 Enhancer 0.2 dbSUPER 4.3 +508.8 508845 2.5 GPA33 LINC01363 STYXL2 FMO9P RPS17P6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FMO9P on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the FMO9P gene promoter:
  • Arnt
  • Cart-1
  • E47
  • FAC1
  • Lhx3a
  • LHX3b
  • PPAR-gamma1
  • PPAR-gamma2
  • S8
  • TBP

Genomic Locations for FMO9P Gene

Genomic Locations for FMO9P Gene
chr1:166,603,916-166,631,400
(GRCh38/hg38)
Size:
27,485 bases
Orientation:
Plus strand
chr1:166,572,912-166,600,637
(GRCh37/hg19)
Size:
27,726 bases
Orientation:
Plus strand

Genomic View for FMO9P Gene

Genes around FMO9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FMO9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FMO9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FMO9P Gene

Proteins for FMO9P Gene

Post-translational modifications for FMO9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for FMO9P Gene

Domains & Families for FMO9P Gene

Gene Families for FMO9P Gene

genes like me logo Genes that share domains with FMO9P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FMO9P Gene

Function for FMO9P Gene

Phenotypes From GWAS Catalog for FMO9P Gene

genes like me logo Genes that share phenotypes with FMO9P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FMO9P Gene

Localization for FMO9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FMO9P Gene

Pathways & Interactions for FMO9P Gene

PathCards logo

SuperPathways for FMO9P Gene

No Data Available

Gene Ontology (GO) - Biological Process for FMO9P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FMO9P Gene

Drugs & Compounds for FMO9P Gene

No Compound Related Data Available

Transcripts for FMO9P Gene

mRNA/cDNA for FMO9P Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FMO9P Gene

No ASD Table

Relevant External Links for FMO9P Gene

GeneLoc Exon Structure for
FMO9P

Expression for FMO9P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FMO9P Gene

mRNA differential expression in normal tissues according to GTEx for FMO9P Gene

This gene is overexpressed in Bladder (x24.6), Esophagus - Mucosa (x12.4), and Minor Salivary Gland (x11.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for FMO9P

SOURCE GeneReport for Unigene cluster for FMO9P Gene:

Hs.348539
genes like me logo Genes that share expression patterns with FMO9P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FMO9P Gene

Orthologs for FMO9P Gene

Evolution for FMO9P Gene

ENSEMBL:
Gene Tree for FMO9P (if available)
TreeFam:
Gene Tree for FMO9P (if available)

No data available for Orthologs for FMO9P Gene

Paralogs for FMO9P Gene

No data available for Paralogs for FMO9P Gene

Variants for FMO9P Gene

Structural Variations from Database of Genomic Variants (DGV) for FMO9P Gene

Variant ID Type Subtype PubMed ID
esv2674242 CNV deletion 23128226
esv2758975 CNV loss 17122850
esv34401 CNV loss 17911159
esv3578237 CNV loss 25503493
esv3587830 CNV loss 21293372
esv3587833 CNV loss 21293372
esv3587834 CNV loss 21293372
esv3890737 CNV loss 25118596

Additional Variant Information for FMO9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FMO9P

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for FMO9P Gene

Disorders for FMO9P Gene

Additional Disease Information for FMO9P

No disorders were found for FMO9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FMO9P Gene

Publications for FMO9P Gene

  1. Organization and evolution of the flavin-containing monooxygenase genes of human and mouse: identification of novel gene and pseudogene clusters. (PMID: 15077013) Hernandez D … Shephard EA (Pharmacogenetics 2004) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for FMO9P Gene

Sources for FMO9P Gene