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FLT1 Gene(Protein Coding)

Fms Related Tyrosine Kinase 1

GCID:
GC13M028300
GIFtS:
62
Genes Participants
UDN Logo

Aliases for FLT1 Gene

Aliases for FLT1 Gene

  • Fms Related Tyrosine Kinase 1 2 3 5
  • Vascular Permeability Factor Receptor 2 3 4
  • Fms-Related Tyrosine Kinase 1 (Vascular Endothelial Growth Factor/Vascular Permeability Factor Receptor) 2 3
  • Vascular Endothelial Growth Factor Receptor 1 2 3
  • Tyrosine-Protein Kinase Receptor FLT 3 4
  • Tyrosine-Protein Kinase FRT 3 4
  • Fms-Like Tyrosine Kinase 1 3 4
  • EC 2.7.10.1 4 56
  • VEGFR-1 3 4
  • VEGFR1 3 4
  • FLT-1 3 4
  • FLT 3 4
  • Fms-Related Tyrosine Kinase 1 2
  • EC 2.7.10 56
  • FRT 4

External Ids for FLT1 Gene

Previous HGNC Symbols for FLT1 Gene

  • FLT

Previous GeneCards Identifiers for FLT1 Gene

  • GC13M026854
  • GC13M022854
  • GC13M027805
  • GC13M026673
  • GC13M027773
  • GC13M028874
  • GC13M009695

Summaries for FLT1 Gene

Entrez Gene Summary for FLT1 Gene

  • This gene encodes a member of the vascular endothelial growth factor receptor (VEGFR) family. VEGFR family members are receptor tyrosine kinases (RTKs) which contain an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and a tyrosine kinase (TK) domain within the cytoplasmic domain. This protein binds to VEGFR-A, VEGFR-B and placental growth factor and plays an important role in angiogenesis and vasculogenesis. Expression of this receptor is found in vascular endothelial cells, placental trophoblast cells and peripheral blood monocytes. Multiple transcript variants encoding different isoforms have been found for this gene. Isoforms include a full-length transmembrane receptor isoform and shortened, soluble isoforms. The soluble isoforms are associated with the onset of pre-eclampsia.[provided by RefSeq, May 2009]

GeneCards Summary for FLT1 Gene

FLT1 (Fms Related Tyrosine Kinase 1) is a Protein Coding gene. Diseases associated with FLT1 include Pre-Eclampsia and Anal Canal Squamous Cell Carcinoma. Among its related pathways are Apoptotic Pathways in Synovial Fibroblasts and VEGF Signaling Pathway. Gene Ontology (GO) annotations related to this gene include identical protein binding and protein kinase activity. An important paralog of this gene is KDR.

UniProtKB/Swiss-Prot for FLT1 Gene

  • Tyrosine-protein kinase that acts as a cell-surface receptor for VEGFA, VEGFB and PGF, and plays an essential role in the development of embryonic vasculature, the regulation of angiogenesis, cell survival, cell migration, macrophage function, chemotaxis, and cancer cell invasion. May play an essential role as a negative regulator of embryonic angiogenesis by inhibiting excessive proliferation of endothelial cells. Can promote endothelial cell proliferation, survival and angiogenesis in adulthood. Its function in promoting cell proliferation seems to be cell-type specific. Promotes PGF-mediated proliferation of endothelial cells, proliferation of some types of cancer cells, but does not promote proliferation of normal fibroblasts (in vitro). Has very high affinity for VEGFA and relatively low protein kinase activity; may function as a negative regulator of VEGFA signaling by limiting the amount of free VEGFA and preventing its binding to KDR. Likewise, isoforms lacking a transmembrane domain, such as isoform 2, isoform 3 and isoform 4, may function as decoy receptors for VEGFA. Modulates KDR signaling by forming heterodimers with KDR. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate and the activation of protein kinase C. Mediates phosphorylation of PIK3R1, the regulatory subunit of phosphatidylinositol 3-kinase, leading to activation of phosphatidylinositol kinase and the downstream signaling pathway. Mediates activation of MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Phosphorylates SRC and YES1, and may also phosphorylate CBL. Isoform 1 phosphorylates PLCG. Promotes phosphorylation of AKT1 at Ser-473. Promotes phosphorylation of PTK2/FAK1. Isoform 7 has a truncated kinase domain; it increases phosphorylation of SRC at Tyr-418 by unknown means and promotes tumor cell invasion.

Tocris Summary for FLT1 Gene

  • Vascular endothelial growth factor is a signaling protein involved in the regulation of angiogenesis and vasculogenesis. VEGF binds to and activates a receptor tyrosine kinase, VEGFR, through transphosphorylation. Three VEGFR isoforms have been identified in humans.

Gene Wiki entry for FLT1 Gene

Additional gene information for FLT1 Gene

No data available for CIViC summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLT1 Gene

Genomics for FLT1 Gene

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GeneHancer (GH) Regulatory Elements for FLT1 Gene

Promoters and enhancers for FLT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH13I028493 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 550.8 +0.4 434 3 SIN3A BMI1 ZNF335 ZNF121 GLIS2 SCRT2 EGR2 SP3 ZBTB11 ZNF398 ENSG00000279393 FLT1 GC13M028385
GH13I028496 Enhancer 0.4 ENCODE 550.8 -1.2 -1194 0.2 MEIS2 SUZ12 EZH2 ENSG00000279393 FLT1 LOC105370135
GH13I028407 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 21.7 +86.3 86255 2.8 SMAD1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 ATF7 RUNX3 RXRA FLT1 GC13M028385
GH13I028530 Enhancer 1.4 FANTOM5 Ensembl ENCODE 12.7 -37.1 -37121 3 HDGF PKNOX1 ARNT SIN3A YBX1 FEZF1 ZNF2 ZNF143 ZNF548 REST PAN3 PAN3-AS1 FLT1 POMP POLR1D EEF1A1P3 ENSG00000279393 LOC105370135
GH13I028573 Enhancer 1.5 FANTOM5 Ensembl ENCODE 11.8 -79.6 -79630 2.2 PKNOX1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 FOS ATF7 RUNX3 LOC105370135 POMP FLT1 PAN3 ENSG00000279393
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLT1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the FLT1 gene promoter:

Genomic Locations for FLT1 Gene

Genomic Locations for FLT1 Gene
chr13:28,300,344-28,495,145
(GRCh38/hg38)
Size:
194,802 bases
Orientation:
Minus strand
chr13:28,874,483-29,069,265
(GRCh37/hg19)

Genomic View for FLT1 Gene

Genes around FLT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLT1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FLT1 Gene

Proteins for FLT1 Gene

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  • Protein details for FLT1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P17948-VGFR1_HUMAN
    Recommended name:
    Vascular endothelial growth factor receptor 1
    Protein Accession:
    P17948
    Secondary Accessions:
    • A3E342
    • A3E344
    • A8KA71
    • B0LPF1
    • B2BF46
    • B2BF47
    • B2BF48
    • B3FR89
    • B5A923
    • F5H5L6
    • O60722
    • P16057
    • Q12954

    Protein attributes for FLT1 Gene

    Size:
    1338 amino acids
    Molecular mass:
    150769 Da
    Quaternary structure:
    • Interacts with VEGFA, VEGFB and PGF. Monomer in the absence of bound VEGFA, VEGFB or PGF. Homodimer in the presence of bound VEGFA, VEGFB and PGF. Can also form a heterodimer with KDR. Interacts (when tyrosine phosphorylated) with CBL, CRK, GRB2, NCK1, PIK3R1, PLCG, PSEN1 and PTPN11. Probably interacts also with PTPRB. Interacts with RACK1. Identified in a complex with CBL and CD2AP.

    Three dimensional structures from OCA and Proteopedia for FLT1 Gene

    Alternative splice isoforms for FLT1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FLT1 Gene

Protein Expression for FLT1 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Selected DME Specific Peptides for FLT1 Gene

P17948:
  • KMLKEGAT
  • QVARGME
  • RLPLKWMAPE
  • RDLAARN
  • YLSIIMDP
  • VAVKMLK
  • RIKTFEE
  • HLNVVNLLGACTK
  • WEIFSLG
  • KICDFGLARD
  • KWMAPESIF
  • SRKCIHRDLAARNILLSE
  • GPLMVIVE
  • YSLIIKDV
  • SLSDVEEE
  • VNVKPQIYE
  • YQIMLDCW
  • CKYGNLSN
  • ARERLKLGKSLG
  • GAFGKVVQASAFGIKKSPTCR
  • PDYVRKG
  • DFGLARDI

Post-translational modifications for FLT1 Gene

  • Autophosphorylated on tyrosine residues upon ligand binding. Autophosphorylation occurs in trans, i.e. one subunit of the dimeric receptor phosphorylates tyrosine residues on the other subunit. Phosphorylation at Tyr-1169 is important for interaction with PLCG. Phosphorylation at Tyr-1213 is important for interaction with PIK3R1, PTPN11, GRB2, and PLCG. Phosphorylation at Tyr-1333 is important for endocytosis and for interaction with CBL, NCK1 and CRK. Is probably dephosphorylated by PTPRB.
  • N-glycosylated.
  • Ubiquitinated after VEGFA-mediated autophosphorylation, leading to proteolytic degradation.
  • Glycosylation at posLast=100100, Asn164, posLast=196196, posLast=251251, posLast=323323, Asn402, Asn417, posLast=474474, posLast=547547, Asn597, posLast=620620, Asn625, and posLast=666666
  • Modification sites at PhosphoSitePlus

Other Protein References for FLT1 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

  • Santa Cruz Biotechnology (SCBT) Antibodies for FLT1

Domains & Families for FLT1 Gene

Gene Families for FLT1 Gene

HGNC:
IUPHAR :
Human Protein Atlas (HPA):
  • Cancer-related genes
  • Disease related genes
  • Enzymes
  • FDA approved drug targets
  • Plasma proteins
  • Predicted intracellular proteins
  • Predicted membrane proteins
  • Predicted secreted proteins

Protein Domains for FLT1 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for FLT1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P17948

UniProtKB/Swiss-Prot:

VGFR1_HUMAN :
  • The second and third Ig-like C2-type (immunoglobulin-like) domains are sufficient for VEGFA binding.
  • Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
Domain:
  • The second and third Ig-like C2-type (immunoglobulin-like) domains are sufficient for VEGFA binding.
Family:
  • Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
genes like me logo Genes that share domains with FLT1: view

Function for FLT1 Gene

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Molecular function for FLT1 Gene

GENATLAS Biochemistry:
fms-related receptor tyrosine kinase 1,expressed on the surface on endothelial cells
UniProtKB/Swiss-Prot CatalyticActivity:
ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate.
UniProtKB/Swiss-Prot EnzymeRegulation:
Present in an inactive conformation in the absence of bound ligand. Binding of VEGFA, VEGFB or PGF leads to dimerization and activation by autophosphorylation on tyrosine residues.
UniProtKB/Swiss-Prot Function:
Tyrosine-protein kinase that acts as a cell-surface receptor for VEGFA, VEGFB and PGF, and plays an essential role in the development of embryonic vasculature, the regulation of angiogenesis, cell survival, cell migration, macrophage function, chemotaxis, and cancer cell invasion. May play an essential role as a negative regulator of embryonic angiogenesis by inhibiting excessive proliferation of endothelial cells. Can promote endothelial cell proliferation, survival and angiogenesis in adulthood. Its function in promoting cell proliferation seems to be cell-type specific. Promotes PGF-mediated proliferation of endothelial cells, proliferation of some types of cancer cells, but does not promote proliferation of normal fibroblasts (in vitro). Has very high affinity for VEGFA and relatively low protein kinase activity; may function as a negative regulator of VEGFA signaling by limiting the amount of free VEGFA and preventing its binding to KDR. Likewise, isoforms lacking a transmembrane domain, such as isoform 2, isoform 3 and isoform 4, may function as decoy receptors for VEGFA. Modulates KDR signaling by forming heterodimers with KDR. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate and the activation of protein kinase C. Mediates phosphorylation of PIK3R1, the regulatory subunit of phosphatidylinositol 3-kinase, leading to activation of phosphatidylinositol kinase and the downstream signaling pathway. Mediates activation of MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Phosphorylates SRC and YES1, and may also phosphorylate CBL. Isoform 1 phosphorylates PLCG. Promotes phosphorylation of AKT1 at Ser-473. Promotes phosphorylation of PTK2/FAK1. Isoform 7 has a truncated kinase domain; it increases phosphorylation of SRC at Tyr-418 by unknown means and promotes tumor cell invasion.
UniProtKB/Swiss-Prot Induction:
Up-regulated in coculture of VSMC/endothelial cell (EC) or by direct exposure to VEGF of VSMC monoculture. Up-regulated from the second trimester of pregnancy to the term and in the placenta of women with preeclampsia (PE). Up-regulated in monocytes exposed to bacterial lipopolysaccharide (LPS).

Enzyme Numbers (IUBMB) for FLT1 Gene

Phenotypes From GWAS Catalog for FLT1 Gene

Gene Ontology (GO) - Molecular Function for FLT1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004672 protein kinase activity IEA --
GO:0004713 protein tyrosine kinase activity IEA --
GO:0004714 transmembrane receptor protein tyrosine kinase activity TAS 8248162
GO:0005021 vascular endothelial growth factor-activated receptor activity IMP 11312102
GO:0005515 protein binding IPI 1312256
genes like me logo Genes that share ontologies with FLT1: view
genes like me logo Genes that share phenotypes with FLT1: view

Animal Models for FLT1 Gene

MGI Knock Outs for FLT1:

Animal Model Products

Clone Products

  • Addgene plasmids for FLT1

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for FLT1 Gene

Localization for FLT1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for FLT1 Gene

Isoform 1: Cell membrane; Single-pass type I membrane protein. Endosome. Note=Autophosphorylation promotes ubiquitination and endocytosis.
Isoform 2: Secreted.
Isoform 3: Secreted.
Isoform 4: Secreted.
Isoform 5: Cytoplasm.
Isoform 6: Cytoplasm.
Isoform 7: Cytoplasm.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for FLT1 gene
Compartment Confidence
plasma membrane 5
extracellular 5
cytoskeleton 5
endosome 5
nucleus 2
endoplasmic reticulum 2
cytosol 2
mitochondrion 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Plasma membrane (3)
  • Actin filaments (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for FLT1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0005615 extracellular space TAS 8248162
GO:0005737 cytoplasm IEA --
GO:0005768 endosome IEA --
GO:0005886 plasma membrane TAS --
genes like me logo Genes that share ontologies with FLT1: view

Pathways & Interactions for FLT1 Gene

genes like me logo Genes that share pathways with FLT1: view

SIGNOR curated interactions for FLT1 Gene

Activates:
Is activated by:
Is inactivated by:

Gene Ontology (GO) - Biological Process for FLT1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001525 angiogenesis IEA --
GO:0002548 monocyte chemotaxis IDA 8605350
GO:0006468 protein phosphorylation IEA --
GO:0006935 chemotaxis IEA --
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway TAS 2158038
genes like me logo Genes that share ontologies with FLT1: view

Drugs & Compounds for FLT1 Gene

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(105) Drugs for FLT1 Gene - From: DrugBank, PharmGKB, ApexBio, DGIdb, FDA Approved Drugs, IUPHAR, HMDB, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Sunitinib Approved, Investigational Pharma Target, inhibitor VEGFR/PDGFRβ/ KIT/ FLT3/RET/CSF-1R inhibitor, RTK inhibitor, Potent VEGFR, PDGFRbeta and KIT inhibitor, Kinase Inhibitors, Vascular endothelial growth factor (VEGF) and VEGF receptor (VEGFR) inhibitors 518
Pazopanib Approved Pharma Target, inhibitor VEFGR, c-Kit, and PDGFR inhibitor, Kinase Inhibitors, Vascular endothelial growth factor (VEGF) and VEGF receptor (VEGFR) inhibitors 0
regorafenib Approved Pharma Target, inhibitor Inhibitor of VEGFR/PDGFR/FGFR/mutant kit/RET/Raf-1, Kinase Inhibitors, Vascular endothelial growth factor (VEGF) and VEGF receptor (VEGFR) inhibitors 0
Axitinib Approved, Investigational Pharma Target, inhibitor, Inhibition Kinase Inhibitors, Vascular endothelial growth factor (VEGF) and VEGF receptor (VEGFR) inhibitors 116
Lenvatinib Approved, Investigational Pharma Target, inhibitor Kinase Inhibitors, Vascular endothelial growth factor (VEGF) and VEGF receptor (VEGFR) inhibitors 68

(23) Additional Compounds for FLT1 Gene - From: Novoseek, Tocris, and HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
ADP
  • Adenosindiphosphorsaeure
  • Adenosine 5'-pyrophosphate
  • Adenosine diphosphate
  • Adenosine pyrophosphate
  • Adenosine-5'-diphosphate
 Full agonist, Agonist 58-64-0
XL 184
849217-68-1

(4) Tocris Compounds for FLT1 Gene

Compound Action Cas Number
SU 4312 Potent inhibitor of VEGFR tyrosine kinase 5812-07-7
SU 5416 VEGFR inhibitor. Also inhibits KIT, RET, MET and FLT3 204005-46-9
Sunitinib malate Potent VEGFR, PDGFRbeta and KIT inhibitor 341031-54-7
XL 184 Potent VEGFR inhibitor; also inhibits other RTKs 849217-68-1

(30) ApexBio Compounds for FLT1 Gene

Compound Action Cas Number
(E)-FeCP-oxindole 884338-18-5
(Z)-FeCP-oxindole 1137967-28-2
Axitinib (AG 013736) VEGFR1/ c-Kit inhibitor 319460-85-0
BIBF 1120 VEGFR/PDGF/FGFR inhibitor 656247-17-5
Cabozantinib (XL184, BMS-907351) VEGFR2/Met/Ret/Kit/FLT//AXL inhibitor 849217-68-1
Cediranib (AZD217) VEGFR inhibitor receptor,highly potent 288383-20-0
DMH4 515880-75-8
Dovitinib (TKI258) Lactate Oral tyrosine kinase inhibitor (TKI) against FGFR1–3, VEGFR1–3, and platelet-derived growth factor receptor (PDGFR) 915769-50-5
Dovitinib (TKI-258, CHIR-258) Multitargeted RTK inhibitor 405169-16-6
Dovitinib Dilactic acid 852433-84-2
Foretinib (GSK1363089) VEGF and HGF receptor inhibitor 849217-64-7
Fruquintinib(HMPL-013) Potent and selective inhibitor of VEGFR 1, 2, 3 1194506-26-7
Ki8751 VEGFR-2 inhibitor,potent and selective 228559-41-9
KRN 633 VEGFR inhibitor,ATP-competitive 286370-15-8
Lenvatinib (E7080) VEGFR inhibitor 417716-92-8
Linifanib (ABT-869) VEGFR/PDGFR inhibitor 796967-16-3
MGCD-265 Met/Flt/Flk/Ron/Tie-2 inhibitor 875337-44-3
Motesanib Diphosphate (AMG-706) VEGFR/ PDGFR/c-Kit/Ret inhibitor 857876-30-3
OSI-930 Inhibitor of Kit, KDR, Flt, CSF-1R, c-Raf and Lck 728033-96-3
Pazopanib (GW-786034) VEGFR/PDGFR/FGFR inhibitor 635702-64-6
Pazopanib Hydrochloride VEGFR/PDGFR/FGFR/c-Kit/ c-Fms inhibitor 635702-64-6
PD 173074 FGFR inhibitor 219580-11-7
SKLB610 Potent VEGFR inhibitor 1125780-41-7
SU 4312 5812-07-7
Sunitinib RTK inhibitor 557795-19-4
Sunitinib malate VEGFR/PDGFRβ/ KIT/ FLT3/RET/CSF-1R inhibitor 341031-54-7
Tivozanib (AV-951) VEGFR inhibitor,potent and selective 475108-18-0
Vatalanib VEGFR-1/-2 inhibitor,cell-permeable 212141-54-3
Vatalanib (PTK787) 2HCl Tyrosine kinase receptor inhibitor 212141-51-0
ZM 306416 VEGFR (Flt and KDR) inhibitor 690206-97-4
genes like me logo Genes that share compounds with FLT1: view

Drug Products

Transcripts for FLT1 Gene

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mRNA/cDNA for FLT1 Gene

(6) REFSEQ mRNAs :
(27) Additional mRNA sequences :
(328) Selected AceView cDNA sequences:
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLT1 Gene

Fms-related tyrosine kinase 1:
Representative Sequences:

Clone Products

  • Addgene plasmids for FLT1

Alternative Splicing Database (ASD) splice patterns (SP) for FLT1 Gene

No ASD Table

Relevant External Links for FLT1 Gene

GeneLoc Exon Structure for
FLT1
ECgene alternative splicing isoforms for
FLT1

Expression for FLT1 Gene

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mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLT1 Gene

mRNA expression in normal human tissues for FLT1 Gene
mRNA expression by BioGPS for FLT1 GenemRNA expression by GTEx for FLT1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for FLT1 Gene

This gene is overexpressed in Heart (19.3), Placenta (18.5), Pancreatic juice (11.0), and Plasma (8.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for FLT1 Gene



NURSA nuclear receptor signaling pathways regulating expression of FLT1 Gene:

FLT1

SOURCE GeneReport for Unigene cluster for FLT1 Gene:

Hs.594454

mRNA Expression by UniProt/SwissProt for FLT1 Gene:

P17948-VGFR1_HUMAN
Tissue specificity: Detected in normal lung, but also in placenta, liver, kidney, heart and brain tissues. Specifically expressed in most of the vascular endothelial cells, and also expressed in peripheral blood monocytes. Isoform 2 is strongly expressed in placenta. Isoform 3 is expressed in corneal epithelial cells (at protein level). Isoform 3 is expressed in vascular smooth muscle cells (VSMC).

Evidence on tissue expression from TISSUES for FLT1 Gene

  • Heart(3.7)
  • Nervous system(3.5)
  • Lung(3)
  • Blood(2.9)
  • Muscle(2.8)
  • Eye(2.7)
  • Liver(2.7)
  • Kidney(2.6)
  • Spleen(2.5)
  • Bone marrow(2.2)
  • Intestine(2.2)
  • Thyroid gland(2.2)
genes like me logo Genes that share expression patterns with FLT1: view

No data available for mRNA differential expression in normal tissues , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLT1 Gene

Orthologs for FLT1 Gene

This gene was present in the common ancestor of animals.

Orthologs for FLT1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia FLT1 33 34
  • 99.43 (n)
dog
(Canis familiaris)
 Mammalia FLT1 33 34
  • 90.3 (n)
cow
(Bos Taurus)
 Mammalia FLT1 33 34
  • 85.19 (n)
oppossum
(Monodelphis domestica)
 Mammalia FLT1 34
  • 82 (a)
 OneToOne
mouse
(Mus musculus)
 Mammalia Flt1 33 16 34
  • 81.89 (n)
platypus
(Ornithorhynchus anatinus)
 Mammalia FLT1 34
  • 72 (a)
 OneToOne
chicken
(Gallus gallus)
 Aves FLT1 33 34
  • 73.02 (n)
lizard
(Anolis carolinensis)
 Reptilia FLT1 34
  • 65 (a)
 OneToOne
zebrafish
(Danio rerio)
 Actinopterygii flt1 33 34
  • 58.31 (n)
-- 33
fruit fly
(Drosophila melanogaster)
 Insecta tor 35
  • 46 (a)
CG3277 35
  • 34 (a)
Cad96Ca 34
  • 29 (a)
 ManyToMany
Pvr 34
  • 21 (a)
 ManyToMany
worm
(Caenorhabditis elegans)
 Secernentea Y50D4B.6 35
  • 43 (a)
kin-16 35
  • 32 (a)
R09D1.12 35
  • 30 (a)
ver-2 35
  • 27 (a)
ver-3 35
  • 22 (a)
sea squirt
(Ciona savignyi)
 Ascidiacea -- 34
  • 36 (a)
 OneToMany
sea squirt
(Ciona intestinalis)
 Ascidiacea Cin.3210 33
Species where no ortholog for FLT1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for FLT1 Gene

ENSEMBL:
Gene Tree for FLT1 (if available)
TreeFam:
Gene Tree for FLT1 (if available)

Paralogs for FLT1 Gene

Paralogs for FLT1 Gene

(52) SIMAP similar genes for FLT1 Gene using alignment to 7 proteins:

Pseudogenes.org Pseudogenes for FLT1 Gene

genes like me logo Genes that share paralogs with FLT1: view

Variants for FLT1 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Sequence variations from dbSNP and Humsavar for FLT1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs148695719 not-provided, Carcinoma of colon 28,322,872(-) T/A coding_sequence_variant, genic_downstream_transcript_variant, synonymous_variant
rs2296189 not-provided, Carcinoma of colon 28,319,505(-) A/C/G coding_sequence_variant, genic_downstream_transcript_variant, synonymous_variant
rs537105078 not-provided, Carcinoma of colon 28,327,589(-) C/G genic_downstream_transcript_variant, intron_variant
rs537403174 not-provided, Carcinoma of colon 28,317,613(-) T/G genic_downstream_transcript_variant, intron_variant
rs553261958 A glioma low grade oligodendroglioma sample 28,345,458(-) C/T coding_sequence_variant, genic_downstream_transcript_variant, missense_variant

Structural Variations from Database of Genomic Variants (DGV) for FLT1 Gene

Variant ID Type Subtype PubMed ID
esv3388394 CNV duplication 20981092
esv34052 CNV loss 18971310
esv3412790 CNV duplication 20981092
esv3550237 CNV deletion 23714750
nsv455850 CNV loss 19166990
nsv561389 CNV loss 21841781

Variation tolerance for FLT1 Gene

Residual Variation Intolerance Score: 3.25% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.40; 42.46% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for FLT1 Gene

Human Gene Mutation Database (HGMD)
FLT1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
FLT1

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLT1 Gene

Disorders for FLT1 Gene

MalaCards: The human disease database

(43) MalaCards diseases for FLT1 Gene - From: HGMD, Orphanet, DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
pre-eclampsia
  • toxemia of pregnancy
anal canal squamous cell carcinoma
  • squamous cell carcinoma of the anal canal
eclampsia
  • eclampsia in puerperium
twin-to-twin transfusion syndrome
  • twin twin transfusion syndrome
corneal neovascularization
- elite association - COSMIC cancer census association via MalaCards
Search FLT1 in MalaCards View complete list of genes associated with diseases

UniProtKB/Swiss-Prot

VGFR1_HUMAN
  • Note=Abnormally high expression of soluble isoforms (isoform 2, isoform 3 or isoform 4) may be a cause of preeclampsia.
  • Note=Can contribute to cancer cell survival, proliferation, migration, and invasion, and tumor angiogenesis and metastasis. May contribute to cancer pathogenesis by promoting inflammatory responses and recruitment of tumor-infiltrating macrophages.

Additional Disease Information for FLT1

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
Tumor Gene Database
(TGDB)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with FLT1: view

No data available for Genatlas for FLT1 Gene

Publications for FLT1 Gene

  1. Nucleotide sequence and expression of a novel human receptor-type tyrosine kinase gene (flt) closely related to the fms family. (PMID: 2158038) Shibuya M … Sato M (Oncogene 1990) 2 3 4 22 58
  2. Allelic variations in angiogenic pathway genes are associated with preeclampsia. (PMID: 20223440) Srinivas SK … Elovitz MA (American journal of obstetrics and gynecology 2010) 3 22 44 58
  3. Natural selection of FLT1 alleles and their association with malaria resistance in utero. (PMID: 18779584) Muehlenbachs A … Duffy PE (Proceedings of the National Academy of Sciences of the United States of America 2008) 3 22 44 58
  4. Dinucleotide repeat polymorphism in Fms-like tyrosine kinase-1 (Flt-1) gene is not associated with preeclampsia. (PMID: 18631405) Kim SY … Ryu HM (BMC medical genetics 2008) 3 22 44 58
  5. Expression and function of vascular endothelial growth factor receptor-1 on human colorectal cancer cells. (PMID: 15735759) Fan F … Ellis LM (Oncogene 2005) 3 4 22 58

Products for FLT1 Gene

  • Addgene plasmids for FLT1