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Aliases for FLNB-AS1 Gene

Subcategory (RNA class) for FLNB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FLNB-AS1 Gene

  • FLNB Antisense RNA 1 2 3 5
  • FLNB Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FLNB-AS1 Gene

Summaries for FLNB-AS1 Gene

GeneCards Summary for FLNB-AS1 Gene

FLNB-AS1 (FLNB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FLNB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLNB-AS1 Gene

Genomics for FLNB-AS1 Gene

GeneHancer (GH) Regulatory Elements for FLNB-AS1 Gene

Promoters and enhancers for FLNB-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I058169 Enhancer 0.3 dbSUPER 550.8 +0.6 609 1.6 ZNF24 FLNB-AS1 LOC105377650 DNASE1L3 RPP14 GC03P058010 FLNB
GH03I058332 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 53.9 -163.8 -163823 4.6 FOXA2 ARNT ARID4B SIN3A FEZF1 ZNF2 ZNF766 CBX5 ZNF416 ZNF207 PXK DENND6A FLNB-AS1 FLNB KCTD6 RPP14 PDE12 HTD2 FAM107A ABHD6
GH03I058046 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 22.3 +119.4 119432 9 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FLNB-AS1 FLNB DENND6A PXK GC03P058010
GH03I057555 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.3 +613.9 613876 3.4 CLOCK MLX DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 PDE12 GC03M057554 DENND6A APPL1 CCDC66 FAM208A FLNB-AS1 FLNB DENND6A-DT HESX1
GH03I058034 Enhancer 1.4 Ensembl ENCODE dbSUPER 16.5 +130.3 130251 11.9 HDGF PKNOX1 FOXA2 SMAD1 ARID4B SIN3A FEZF1 ZNF2 IRF4 YY1 FLNB FLNB-AS1 GC03P058010
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLNB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FLNB-AS1 Gene

Genomic Locations for FLNB-AS1 Gene
chr3:58,162,547-58,170,636
(GRCh38/hg38)
Size:
8,090 bases
Orientation:
Minus strand
chr3:58,148,274-58,156,363
(GRCh37/hg19)

Genomic View for FLNB-AS1 Gene

Genes around FLNB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLNB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLNB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLNB-AS1 Gene

Proteins for FLNB-AS1 Gene

Post-translational modifications for FLNB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLNB-AS1 Gene

Domains & Families for FLNB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLNB-AS1 Gene

Function for FLNB-AS1 Gene

Phenotypes From GWAS Catalog for FLNB-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLNB-AS1 Gene

Localization for FLNB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLNB-AS1 Gene

Pathways & Interactions for FLNB-AS1 Gene

SuperPathways for FLNB-AS1 Gene

No Data Available

Interacting Proteins for FLNB-AS1 Gene

Gene Ontology (GO) - Biological Process for FLNB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLNB-AS1 Gene

Drugs & Compounds for FLNB-AS1 Gene

No Compound Related Data Available

Transcripts for FLNB-AS1 Gene

mRNA/cDNA for FLNB-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLNB-AS1 Gene

No ASD Table

Relevant External Links for FLNB-AS1 Gene

GeneLoc Exon Structure for
FLNB-AS1
ECgene alternative splicing isoforms for
FLNB-AS1

Expression for FLNB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLNB-AS1 Gene

genes like me logo Genes that share expression patterns with FLNB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLNB-AS1 Gene

Orthologs for FLNB-AS1 Gene

Evolution for FLNB-AS1 Gene

ENSEMBL:
Gene Tree for FLNB-AS1 (if available)
TreeFam:
Gene Tree for FLNB-AS1 (if available)

No data available for Orthologs for FLNB-AS1 Gene

Paralogs for FLNB-AS1 Gene

No data available for Paralogs for FLNB-AS1 Gene

Variants for FLNB-AS1 Gene

Sequence variations from dbSNP and Humsavar for FLNB-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1015772607 uncertain-significance, FLNB-Related Spectrum Disorders 58,172,155(-) G/A upstream_transcript_variant
rs1022080374 uncertain-significance, FLNB-Related Spectrum Disorders 58,171,344(-) G/A/C upstream_transcript_variant
rs1052970835 uncertain-significance, FLNB-Related Spectrum Disorders 58,172,040(-) A/G upstream_transcript_variant
rs1131264 likely-benign, FLNB-Related Spectrum Disorders 58,171,792(-) G/C upstream_transcript_variant
rs1131312 likely-benign, FLNB-Related Spectrum Disorders 58,171,979(-) G/A upstream_transcript_variant

Additional Variant Information for FLNB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FLNB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FLNB-AS1 Gene

Disorders for FLNB-AS1 Gene

Additional Disease Information for FLNB-AS1

No disorders were found for FLNB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLNB-AS1 Gene

Publications for FLNB-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for FLNB-AS1 Gene

Sources for FLNB-AS1 Gene

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