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Aliases for FLJ45513 Gene

Aliases for FLJ45513 Gene

  • Uncharacterized LOC729220 3
  • AC027801.1 5

External Ids for FLJ45513 Gene

Previous GeneCards Identifiers for FLJ45513 Gene

  • GC17P045278
  • GC17P047924

Summaries for FLJ45513 Gene

GeneCards Summary for FLJ45513 Gene

FLJ45513 (Uncharacterized LOC729220) is a Protein Coding gene.

Additional gene information for FLJ45513 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ45513 Gene

Genomics for FLJ45513 Gene

GeneHancer (GH) Regulatory Elements for FLJ45513 Gene

Promoters and enhancers for FLJ45513 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I049844 Enhancer 0.6 Ensembl ENCODE 550.8 +0.8 833 1.5 ZNF121 RXRA NR2F2 FLJ45513 SPOP TAC4
GH17I049190 Enhancer 1.7 FANTOM5 Ensembl ENCODE 52.7 -652.0 -651976 4 CLOCK MLX DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 ZNF548 TRQ-TTG1-1 ENSG00000262837 UBE2Z FAM117A FLJ45513 ENSG00000230532 KAT7 TAC4 PICART1 CALCOCO2
GH17I049758 Promoter/Enhancer 2.7 VISTA EPDnew Ensembl ENCODE dbSUPER 21.5 -82.8 -82766 6.4 HDGF PKNOX1 CLOCK ARNT ARID4B SIN3A ZNF2 IRF4 YY1 POLR2B FAM117A ENSG00000262837 UBE2Z LUC7L3 FLJ45513 SPOP COL1A1 TAC4 SLC35B1 ITGA3
GH17I048994 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 19.3 -845.3 -845267 10.8 HDGF HNRNPUL1 PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 IGF2BP1 ENSG00000250838 ENSG00000262837 UBE2Z FAM117A FLJ45513 ENSG00000238804 PRAC1 PRAC2 HOXB13
GH17I049779 Enhancer 1.1 FANTOM5 Ensembl ENCODE 40.1 -64.8 -64819 1.4 CTCF TEAD4 BATF IRF4 RAD21 BRD9 ARID2 ZNF143 SMC3 RUNX3 FLJ45513 SLC35B1 NXPH3 LOC100288866 FAM117A KAT7 GC17P049768
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ45513 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the FLJ45513 gene promoter:

Genomic Locations for FLJ45513 Gene

Genomic Locations for FLJ45513 Gene
chr17:49,844,715-49,848,837
(GRCh38/hg38)
Size:
4,123 bases
Orientation:
Plus strand
chr17:47,923,272-47,926,199
(GRCh37/hg19)

Genomic View for FLJ45513 Gene

Genes around FLJ45513 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ45513 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ45513 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ45513 Gene

Proteins for FLJ45513 Gene

Post-translational modifications for FLJ45513 Gene

No Post-translational modifications

Other Protein References for FLJ45513 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FLJ45513 Gene

Domains & Families for FLJ45513 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ45513 Gene

Function for FLJ45513 Gene

Phenotypes From GWAS Catalog for FLJ45513 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ45513 Gene

Localization for FLJ45513 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ45513 Gene

Pathways & Interactions for FLJ45513 Gene

SuperPathways for FLJ45513 Gene

No Data Available

Interacting Proteins for FLJ45513 Gene

Gene Ontology (GO) - Biological Process for FLJ45513 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ45513 Gene

Drugs & Compounds for FLJ45513 Gene

No Compound Related Data Available

Transcripts for FLJ45513 Gene

mRNA/cDNA for FLJ45513 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ45513 Gene

Uncharacterized LOC729220:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ45513 Gene

No ASD Table

Relevant External Links for FLJ45513 Gene

GeneLoc Exon Structure for
FLJ45513

Expression for FLJ45513 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ45513 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ45513 Gene

This gene is overexpressed in Whole Blood (x5.1).

SOURCE GeneReport for Unigene cluster for FLJ45513 Gene:

Hs.434138
genes like me logo Genes that share expression patterns with FLJ45513: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ45513 Gene

Orthologs for FLJ45513 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FLJ45513 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC746831 33
  • 97.95 (n)
Species where no ortholog for FLJ45513 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FLJ45513 Gene

ENSEMBL:
Gene Tree for FLJ45513 (if available)
TreeFam:
Gene Tree for FLJ45513 (if available)

Paralogs for FLJ45513 Gene

No data available for Paralogs for FLJ45513 Gene

Variants for FLJ45513 Gene

Sequence variations from dbSNP and Humsavar for FLJ45513 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000778850 -- 49,846,990(+) T/A/C coding_sequence_variant, synonymous_variant
rs1002022214 -- 49,846,045(+) C/A intron_variant
rs1002363060 -- 49,846,252(+) C/G/T intron_variant
rs1002721783 -- 49,846,877(+) C/T intron_variant
rs1002816845 -- 49,847,120(+) C/T coding_sequence_variant, missense_variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ45513 Gene

Variant ID Type Subtype PubMed ID
esv25474 CNV loss 19812545
nsv819145 CNV loss 19587683
nsv821118 CNV duplication 20802225
nsv828037 CNV gain 20364138

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FLJ45513 Gene

Disorders for FLJ45513 Gene

Additional Disease Information for FLJ45513

No disorders were found for FLJ45513 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ45513 Gene

Publications for FLJ45513 Gene

No publications were found for FLJ45513 Gene.

Products for FLJ45513 Gene

Sources for FLJ45513 Gene

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