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Aliases for FLJ37453 Gene

Subcategory (RNA class) for FLJ37453 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ37453 Gene

  • Uncharacterized LOC729614 3 5

External Ids for FLJ37453 Gene

Previous GeneCards Identifiers for FLJ37453 Gene

  • GC01M016033
  • GC01P016034
  • GC01M016161

Summaries for FLJ37453 Gene

GeneCards Summary for FLJ37453 Gene

FLJ37453 (Uncharacterized LOC729614) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FLJ37453 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ37453 Gene

Genomics for FLJ37453 Gene

GeneHancer (GH) Regulatory Elements for FLJ37453 Gene

Promoters and enhancers for FLJ37453 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I015846 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.6 -1552 6.4 CLOCK FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 MEF2D SPEN FLJ37453 ENSG00000237938 ZBTB17 ARHGEF19 HSPB7 CLCNKA NECAP2 RPS16P1 RPL22P3
GH01I015892 Enhancer 1.3 Ensembl ENCODE dbSUPER 24 -45.4 -45371 1.9 HDAC1 HDGF PKNOX1 TAF9B ARNT ZBTB40 YY1 CHAMP1 ZNF121 ZNF766 FLJ37453 SPEN HSPB7 SRARP GC01M015910 GC01P015874 GC01P015847
GH01I015829 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 14.4 +14.1 14146 9.6 MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC ENSG00000237938 ZBTB17 SPEN ARHGEF19 CLCNKA NECAP2 FLJ37453 HSPB7 RPS16P1 RPL22P3
GH01I015882 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 13.2 -37.2 -37166 5.4 HDGF PKNOX1 SMAD1 ARNT ARID4B DMAP1 ZNF2 YY1 POLR2B ZNF766 HSPB7 SPEN FLJ37453 CLCNKA EIF1AXP1 SRARP PLEKHM2 ZBTB17 EFHD2 GC01P015874
GH01I016544 Enhancer 1.3 Ensembl ENCODE 18 -697.2 -697167 2 HDGF CLOCK MLX ARNT ARID4B SIN3A FEZF1 ZNF2 ZNF213 E2F8 TRNAG1 CROCC SPEN LINC01772 CROCCP3 FLJ37453 TRE-TTC3-1 ENSG00000237301 NBPF1 ENSG00000261135
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ37453 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the FLJ37453 gene promoter:

Genomic Locations for FLJ37453 Gene

Genomic Locations for FLJ37453 Gene
chr1:15,834,215-15,848,147
(GRCh38/hg38)
Size:
13,933 bases
Orientation:
Minus strand
chr1:16,160,560-16,174,642
(GRCh37/hg19)

Genomic View for FLJ37453 Gene

Genes around FLJ37453 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ37453 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ37453 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ37453 Gene

Proteins for FLJ37453 Gene

Post-translational modifications for FLJ37453 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ37453 Gene

Domains & Families for FLJ37453 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ37453 Gene

Function for FLJ37453 Gene

Phenotypes From GWAS Catalog for FLJ37453 Gene

Phenotypes for FLJ37453 Gene

GenomeRNAi human phenotypes for FLJ37453:
genes like me logo Genes that share phenotypes with FLJ37453: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ37453 Gene

Localization for FLJ37453 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ37453 Gene

Pathways & Interactions for FLJ37453 Gene

SuperPathways for FLJ37453 Gene

No Data Available

Interacting Proteins for FLJ37453 Gene

Gene Ontology (GO) - Biological Process for FLJ37453 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ37453 Gene

Drugs & Compounds for FLJ37453 Gene

No Compound Related Data Available

Transcripts for FLJ37453 Gene

mRNA/cDNA for FLJ37453 Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ37453 Gene

Uncharacterized LOC729614:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ37453 Gene

No ASD Table

Relevant External Links for FLJ37453 Gene

GeneLoc Exon Structure for
FLJ37453

Expression for FLJ37453 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ37453 Gene

SOURCE GeneReport for Unigene cluster for FLJ37453 Gene:

Hs.119298
genes like me logo Genes that share expression patterns with FLJ37453: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ37453 Gene

Orthologs for FLJ37453 Gene

Evolution for FLJ37453 Gene

ENSEMBL:
Gene Tree for FLJ37453 (if available)
TreeFam:
Gene Tree for FLJ37453 (if available)

No data available for Orthologs for FLJ37453 Gene

Paralogs for FLJ37453 Gene

No data available for Paralogs for FLJ37453 Gene

Variants for FLJ37453 Gene

Sequence variations from dbSNP and Humsavar for FLJ37453 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000158321 -- 15,837,080(-) C/T intron_variant
rs1000188430 -- 15,836,820(-) C/T non_coding_transcript_variant
rs1000222148 -- 15,840,383(-) A/G intron_variant
rs1000242225 -- 15,836,641(-) G/C/T non_coding_transcript_variant
rs1000481982 -- 15,847,506(-) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ37453 Gene

Variant ID Type Subtype PubMed ID
nsv833647 CNV loss 17160897
nsv545619 CNV loss 21841781
nsv524044 CNV loss 19592680
nsv511126 CNV loss 21212237
nsv3409 CNV deletion 18451855
nsv1012917 CNV loss 25217958
nsv1011969 CNV gain+loss 25217958
esv2764241 CNV loss 21179565
dgv38n100 CNV gain 25217958
dgv37n100 CNV gain 25217958
dgv154n54 CNV loss 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FLJ37453 Gene

Disorders for FLJ37453 Gene

Additional Disease Information for FLJ37453

No disorders were found for FLJ37453 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ37453 Gene

Publications for FLJ37453 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for FLJ37453 Gene

Sources for FLJ37453 Gene

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