Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FLJ31104 Gene

Subcategory (RNA class) for FLJ31104 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ31104 Gene

  • Uncharacterized LOC441072 3 5
  • CTD-2031P19.3 3

External Ids for FLJ31104 Gene

Previous GeneCards Identifiers for FLJ31104 Gene

  • GC05P055326
  • GC05U900656
  • GC05P055290

Summaries for FLJ31104 Gene

GeneCards Summary for FLJ31104 Gene

FLJ31104 (Uncharacterized LOC441072) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FLJ31104 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ31104 Gene

Genomics for FLJ31104 Gene

GeneHancer (GH) Regulatory Elements for FLJ31104 Gene

Promoters and enhancers for FLJ31104 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I055991 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 555.2 -0.8 -808 5.2 HDGF PKNOX1 FOXA2 SMAD1 MLX ARNT ARID4B SIN3A FEZF1 YBX1 IL6ST FLJ31104 SLC38A9 MTREX ENSG00000264281
GH05I055226 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.8 -768.1 -768052 2.2 ARID4B SIN3A ZNF2 ZNF213 ZNF143 KLF13 SP3 REST SMARCB1 ZNF610 MCIDAS MTREX DHX29 LOC105378973 SLC38A9 FLJ31104 LOC100419851 CCNO PIR50338
GH05I055463 Enhancer 0.9 FANTOM5 19.3 -531.1 -531064 0.3 ZNF493 ZNF529 ZFP64 MZF1 ZNF155 ZNF121 ZNF23 ZNF354C ZNF138 KLF7 DHX29 MTREX SLC38A9 RNF138P1 GPX8 FLJ31104 ENSG00000264281 LOC100419851 ENSG00000279883 GC05M055421
GH05I056146 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 11.2 +153.0 153024 2.4 SMAD1 RB1 EBF1 BMI1 BATF IRF4 RELA ZKSCAN1 ZNF316 ATF7 RNA5SP184 RNU6-299P FLJ31104 IL6ST ENSG00000238326 C1GALT1P2 ANKRD55
GH05I056049 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 11.7 +55.5 55451 2.1 SOX6 RAD21 NR2F2 ZNF217 GATA3 SCRT2 IKZF1 TCF7L2 FLJ31104 IL6ST ENSG00000238326 LOC105378976
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ31104 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FLJ31104 Gene

Genomic Locations for FLJ31104 Gene
chr5:55,995,167-56,003,649
(GRCh38/hg38)
Size:
8,483 bases
Orientation:
Plus strand
chr5:55,290,989-55,299,477
(GRCh37/hg19)

Genomic View for FLJ31104 Gene

Genes around FLJ31104 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ31104 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ31104 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ31104 Gene

Proteins for FLJ31104 Gene

Post-translational modifications for FLJ31104 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ31104 Gene

Domains & Families for FLJ31104 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ31104 Gene

Function for FLJ31104 Gene

Phenotypes From GWAS Catalog for FLJ31104 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ31104 Gene

Localization for FLJ31104 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ31104 Gene

Pathways & Interactions for FLJ31104 Gene

SuperPathways for FLJ31104 Gene

No Data Available

Interacting Proteins for FLJ31104 Gene

Gene Ontology (GO) - Biological Process for FLJ31104 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ31104 Gene

Drugs & Compounds for FLJ31104 Gene

No Compound Related Data Available

Transcripts for FLJ31104 Gene

mRNA/cDNA for FLJ31104 Gene

(5) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ31104 Gene

Uncharacterized LOC441072:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ31104 Gene

No ASD Table

Relevant External Links for FLJ31104 Gene

GeneLoc Exon Structure for
FLJ31104

Expression for FLJ31104 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ31104 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ31104 Gene

This gene is overexpressed in Testis (x4.7).

SOURCE GeneReport for Unigene cluster for FLJ31104 Gene:

Hs.482141
genes like me logo Genes that share expression patterns with FLJ31104: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ31104 Gene

Orthologs for FLJ31104 Gene

Evolution for FLJ31104 Gene

ENSEMBL:
Gene Tree for FLJ31104 (if available)
TreeFam:
Gene Tree for FLJ31104 (if available)

No data available for Orthologs for FLJ31104 Gene

Paralogs for FLJ31104 Gene

No data available for Paralogs for FLJ31104 Gene

Variants for FLJ31104 Gene

Sequence variations from dbSNP and Humsavar for FLJ31104 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000316174 -- 56,001,014(+) G/A intron_variant
rs1000578255 -- 56,002,880(+) T/A non_coding_transcript_variant
rs1000912362 -- 55,999,208(+) A/C intron_variant
rs1001308888 -- 55,993,647(+) TTTTTTT/TTTTT/TTTTTT upstream_transcript_variant
rs1001488342 -- 55,997,864(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ31104 Gene

Variant ID Type Subtype PubMed ID
nsv598182 CNV loss 21841781
nsv830307 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FLJ31104 Gene

Disorders for FLJ31104 Gene

Additional Disease Information for FLJ31104

No disorders were found for FLJ31104 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ31104 Gene

Publications for FLJ31104 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FLJ31104 Gene

Sources for FLJ31104 Gene

Content
Loading form....