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Aliases for FLJ20712 Gene

Aliases for FLJ20712 Gene

  • Uncharacterized FLJ20712 3
  • AC008080.1 5

External Ids for FLJ20712 Gene

Previous GeneCards Identifiers for FLJ20712 Gene

  • GC07P033408
  • GC07P033507
  • GC07U901520

Summaries for FLJ20712 Gene

GeneCards Summary for FLJ20712 Gene

FLJ20712 (Uncharacterized FLJ20712) is a Protein Coding gene.

Additional gene information for FLJ20712 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ20712 Gene

Genomics for FLJ20712 Gene

GeneHancer (GH) Regulatory Elements for FLJ20712 Gene

Promoters and enhancers for FLJ20712 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I033724 Enhancer 0.7 FANTOM5 ENCODE 550.8 +0.1 103 4 POLR2A JUN RCOR1 ZXDB FLJ20712 DPY19L1P1 ENSG00000227481
GH07I033668 Enhancer 1.1 FANTOM5 ENCODE 10.8 -56.5 -56481 1.1 PKNOX1 FOXA2 ARNT FEZF1 ZNF2 ZNF121 ZNF213 KLF7 TSHZ1 ZNF488 FLJ20712 GC07M033642
GH07I033764 Enhancer 1 Ensembl ENCODE 11.2 +39.0 38990 1.8 PKNOX1 ARNT ZNF529 FEZF1 RFX5 ZNF213 ZNF366 RCOR1 KLF13 ZNF174 ENSG00000227481 FLJ20712 BMPER RP9P GC07M033786
GH07I033805 Enhancer 1 Ensembl ENCODE 10.5 +81.6 81571 3.4 PKNOX1 BMI1 RAD21 ETS1 ZNF143 FOS CEBPB NFIL3 RFX3 KLF16 ENSG00000227481 FLJ20712 BMPER ENSG00000236494 ENSG00000233219
GH07I033697 Enhancer 0.7 ENCODE 12.1 -26.7 -26690 4.5 SOX13 TFAP4 SAP130 ZNF384 BMI1 CEBPG ZNF644 E4F1 TEAD3 POLR2A FLJ20712 ENSG00000227481 ENSG00000236494 GC07M033642
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ20712 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the FLJ20712 gene promoter:

Genomic Locations for FLJ20712 Gene

Genomic Locations for FLJ20712 Gene
chr7:33,725,981-33,728,456
(GRCh38/hg38)
Size:
2,476 bases
Orientation:
Plus strand
chr7:33,765,593-33,768,068
(GRCh37/hg19)

Genomic View for FLJ20712 Gene

Genes around FLJ20712 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ20712 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ20712 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ20712 Gene

Proteins for FLJ20712 Gene

Post-translational modifications for FLJ20712 Gene

No Post-translational modifications

Other Protein References for FLJ20712 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FLJ20712 Gene

Domains & Families for FLJ20712 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ20712 Gene

Function for FLJ20712 Gene

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ20712 Gene

Localization for FLJ20712 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ20712 Gene

Pathways & Interactions for FLJ20712 Gene

SuperPathways for FLJ20712 Gene

No Data Available

Interacting Proteins for FLJ20712 Gene

Gene Ontology (GO) - Biological Process for FLJ20712 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ20712 Gene

Drugs & Compounds for FLJ20712 Gene

No Compound Related Data Available

Transcripts for FLJ20712 Gene

mRNA/cDNA for FLJ20712 Gene

(3) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ20712 Gene

Uncharacterized FLJ20712:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ20712 Gene

No ASD Table

Relevant External Links for FLJ20712 Gene

GeneLoc Exon Structure for
FLJ20712

Expression for FLJ20712 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ20712 Gene

SOURCE GeneReport for Unigene cluster for FLJ20712 Gene:

Hs.272195
genes like me logo Genes that share expression patterns with FLJ20712: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ20712 Gene

Orthologs for FLJ20712 Gene

Evolution for FLJ20712 Gene

ENSEMBL:
Gene Tree for FLJ20712 (if available)
TreeFam:
Gene Tree for FLJ20712 (if available)

No data available for Orthologs for FLJ20712 Gene

Paralogs for FLJ20712 Gene

No data available for Paralogs for FLJ20712 Gene

Variants for FLJ20712 Gene

Sequence variations from dbSNP and Humsavar for FLJ20712 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000488043 -- 33,729,646(+) G/A downstream_transcript_variant
rs1000823456 -- 33,728,096(+) C/A coding_sequence_variant, missense_variant
rs1001437979 -- 33,728,794(+) T/C 3_prime_UTR_variant
rs1002179096 -- 33,727,885(+) C/G coding_sequence_variant, missense_variant
rs1002439359 -- 33,727,641(+) C/G coding_sequence_variant, synonymous_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for FLJ20712 Gene

Disorders for FLJ20712 Gene

Additional Disease Information for FLJ20712

No disorders were found for FLJ20712 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ20712 Gene

Publications for FLJ20712 Gene

  1. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J … Yang X (Molecular systems biology 2011) 3 58
  2. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C … Larson MG (BMC medical genetics 2007) 44 58
  3. Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment. (PMID: 15782160) Kim J … Iyer VR (Nature methods 2005) 3 58
  4. Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PMID: 8125298) Maruyama K … Sugano S (Gene 1994) 3 58

Products for FLJ20712 Gene

Sources for FLJ20712 Gene

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