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FKBP9P1 Gene(Pseudogene)

FK506 Binding Protein 9 Pseudogene 1

GCID:
GC07M055682
GIFtS:
23
Genes Participants
UDN Logo

Aliases for FKBP9P1 Gene

Aliases for FKBP9P1 Gene

  • FK506 Binding Protein 9 Pseudogene 1 2 3 5
  • FK506 Binding Protein 9-Like 2 3
  • FKBP9L 3 4
  • FK506-Binding Protein 9-Like Protein Pseudogene 4
  • EC 5.2.1.8 56

External Ids for FKBP9P1 Gene

Previous HGNC Symbols for FKBP9P1 Gene

  • FKBP9L

Previous GeneCards Identifiers for FKBP9P1 Gene

  • GC07M055754

Summaries for FKBP9P1 Gene

GeneCards Summary for FKBP9P1 Gene

FKBP9P1 (FK506 Binding Protein 9 Pseudogene 1) is a Pseudogene.

Additional gene information for FKBP9P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FKBP9P1 Gene

Genomics for FKBP9P1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for FKBP9P1 Gene

Promoters and enhancers for FKBP9P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH07I055713 Enhancer 0.2 dbSUPER 550.8 -1.2 -1200 1 FKBP9P1 LOC100420539 PSPHP1 ENSG00000275853
GH07I055698 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +14.1 14134 2.1 FOXA2 ARNT MLX ARID4B DMAP1 ZNF48 NFYC MXD4 MIER2 KAT8 PSPHP1 FKBP9P1 GC07P055685 LOC100420539 RNU6-389P
GH07I055707 Enhancer 1 ENCODE dbSUPER 0.4 +5.2 5229 1.8 HDAC1 ETV1 CEBPG IRF9 FOSL1 POLR2B ZNF316 BRD9 NFE2 ATF7 PSPHP1 FKBP9P1 LOC100420539 RNU6-389P GC07P055685
GH07I055693 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +18.3 18294 3.5 ZNF282 POLR2B CTBP1 E2F8 IKZF1 ZEB2 PSPHP1 ZNF713 GC07P055685 RNU6-389P FKBP9P1 LOC100420539
GH07I055710 Enhancer 0.4 ENCODE dbSUPER 0.8 +2.7 2749 0.2 LOC100420539 FKBP9P1 RNU6-389P GC07P055685
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FKBP9P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FKBP9P1 Gene

Genomic Locations for FKBP9P1 Gene
chr7:55,681,074-55,713,252
(GRCh38/hg38)
Size:
32,179 bases
Orientation:
Minus strand
chr7:55,748,767-55,780,945
(GRCh37/hg19)

Genomic View for FKBP9P1 Gene

Genes around FKBP9P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FKBP9P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FKBP9P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FKBP9P1 Gene

Proteins for FKBP9P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for FKBP9P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q75LS8-FKB9L_HUMAN
    Recommended name:
    Putative FK506-binding protein 9-like protein
    Protein Accession:
    Q75LS8
    Secondary Accessions:
    • B2R7H1

    Protein attributes for FKBP9P1 Gene

    Size:
    142 amino acids
    Molecular mass:
    15591 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FKBP9P1 Gene

Protein Expression for FKBP9P1 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Selected DME Specific Peptides for FKBP9P1 Gene

Q75LS8:
  • PGSAVLVFDI
  • MCVGEKR
  • PPHLGYG

Post-translational modifications for FKBP9P1 Gene

No Post-translational modifications

Domains & Families for FKBP9P1 Gene

Protein Domains for FKBP9P1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FKBP9P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FKBP9P1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FKBP9P1 Gene

Function for FKBP9P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Enzyme Numbers (IUBMB) for FKBP9P1 Gene

genes like me logo Genes that share phenotypes with FKBP9P1: view

Animal Model Products

miRNA for FKBP9P1 Gene

miRTarBase miRNAs that target FKBP9P1

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FKBP9P1 Gene

Localization for FKBP9P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FKBP9P1 Gene

Pathways & Interactions for FKBP9P1 Gene

SuperPathways for FKBP9P1 Gene

PathCards logo More details on SuperPathways for FKBP9P1
No Data Available

Interacting Proteins for FKBP9P1 Gene

Gene Ontology (GO) - Biological Process for FKBP9P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FKBP9P1 Gene

Drugs & Compounds for FKBP9P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FKBP9P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for FKBP9P1 Gene

(1) REFSEQ mRNAs :
(403) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FKBP9P1 Gene

No ASD Table

Relevant External Links for FKBP9P1 Gene

GeneLoc Exon Structure for
FKBP9P1
ECgene alternative splicing isoforms for
FKBP9P1

Expression for FKBP9P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FKBP9P1 Gene

mRNA expression in normal human tissues for FKBP9P1 Gene
mRNA expression by GTEx for FKBP9P1 Gene

mRNA differential expression in normal tissues according to GTEx for FKBP9P1 Gene

This gene is overexpressed in Pancreas (x6.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FKBP9P1 Gene



NURSA nuclear receptor signaling pathways regulating expression of FKBP9P1 Gene:

FKBP9P1
genes like me logo Genes that share expression patterns with FKBP9P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FKBP9P1 Gene

Orthologs for FKBP9P1 Gene

Evolution for FKBP9P1 Gene

ENSEMBL:
Gene Tree for FKBP9P1 (if available)
TreeFam:
Gene Tree for FKBP9P1 (if available)

No data available for Orthologs for FKBP9P1 Gene

Paralogs for FKBP9P1 Gene

No data available for Paralogs for FKBP9P1 Gene

Variants for FKBP9P1 Gene

Sequence variations from dbSNP and Humsavar for FKBP9P1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000244724 -- 55,704,162(-) C/G genic_upstream_transcript_variant, intron_variant
rs1000636451 -- 55,705,373(-) C/A upstream_transcript_variant
rs1000697216 -- 55,706,137(-) T/A upstream_transcript_variant
rs1000708769 -- 55,699,594(-) A/T genic_upstream_transcript_variant, intron_variant
rs1000937300 -- 55,692,804(-) G/A genic_upstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FKBP9P1 Gene

Variant ID Type Subtype PubMed ID
nsv469822 CNV gain 16826518
nsv469612 CNV loss 16826518
nsv1019400 CNV gain 25217958
esv3613248 CNV gain 21293372
esv28230 CNV gain+loss 19812545
esv2734447 CNV deletion 23290073
esv2734425 CNV deletion 23290073
dgv1201e199 CNV deletion 23128226

Additional Variant Information for FKBP9P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FKBP9P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FKBP9P1 Gene

Disorders for FKBP9P1 Gene

Additional Disease Information for FKBP9P1

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for FKBP9P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FKBP9P1 Gene

Publications for FKBP9P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58
  3. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 4 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  5. Genomic organization of mouse and human 65 kDa FK506-binding protein genes and evolution of the FKBP multigene family. (PMID: 12036304) Patterson CE … Davis EC (Genomics 2002) 2 58

Products for FKBP9P1 Gene

Sources for FKBP9P1 Gene

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