FKBP9P1 Gene (Pseudogene)

FKBP Prolyl Isomerase 9 Pseudogene 1

GC07M055683
GIFtS:
19
See more...

Aliases for FKBP9P1 Gene

Aliases for FKBP9P1 Gene

  • FKBP Prolyl Isomerase 9 Pseudogene 1 2 3 5
  • FK506 Binding Protein 9 Pseudogene 1 2 3
  • FK506 Binding Protein 9-Like 2 3
  • FKBP9L 3 4
  • FK506-Binding Protein 9-Like Protein Pseudogene 4
  • Putative FK506-Binding Protein 9-Like Protein 4
  • EC 5.2.1.8 51
  • MGC20531 2
  • FKBP9P1 5

External Ids for FKBP9P1 Gene

Previous HGNC Symbols for FKBP9P1 Gene

  • FKBP9L

Previous GeneCards Identifiers for FKBP9P1 Gene

  • GC07M055754
  • GC07M055682

Summaries for FKBP9P1 Gene

GeneCards Summary for FKBP9P1 Gene

FKBP9P1 (FKBP Prolyl Isomerase 9 Pseudogene 1) is a Pseudogene.

Additional gene information for FKBP9P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FKBP9P1 Gene

Genomics for FKBP9P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for FKBP9P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH07J055166 Enhancer 0.7 Ensembl 5.9 +546.1 546051 1.2 NONO MCM3 SP1 HES1 ZNF658 YBX1 ZNF488 FOXP1 HDGF ZNF133 FKBP9P1 piR-61945-456 NONHSAG047619.2 GU228573 EGFR LANCL2
GH07J055236 Enhancer 0.3 Ensembl 4.7 +476.1 476051 1.6 NFE2L2 PSPHP1 FKBP9P1 lnc-EGFR-6 piR-32810-120 ELDR LANCL2 EGFR
GH07J055707 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +5.2 5229 1.8 IKZF1 ZEB2 SKIL ZNF316 FOSL1 NFE2 IRF9 ZNF318 NRF1 EP400 PSPHP1 FKBP9P1 lnc-SEPT14-5 LOC100420539 AC091812 LOC101060341 VOPP1
GH07J055693 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +16.6 16556 7 MXD4 CEBPA ZIC2 HOMEZ KDM6A THAP11 FOXA2 ZNF511 SMAD4 SAP130 PSPHP1 ZNF713 AC091812 FKBP9P1 lnc-SEPT14-5 LOC100420539 LOC101060341 VOPP1
GH07J055713 Enhancer 0.6 Ensembl dbSUPER 0.7 -3.9 -3949 7.6 CEBPB ZNF766 CEBPG piR-41195-056 piR-57133-548 PSPHP1 ZNF713 VOPP1 LANCL2 FKBP9P1 RF00017-6173 lnc-SEPT14-5 LOC101060341
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FKBP9P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FKBP9P1 Gene

Latest Assembly
chr7:55,681,074-55,713,252
(GRCh38/hg38)
Size:
32,179 bases
Orientation:
Minus strand

Previous Assembly
chr7:55,748,767-55,772,260
(GRCh37/hg19 by Entrez Gene)
Size:
23,494 bases
Orientation:
Minus strand

chr7:55,748,767-55,780,945
(GRCh37/hg19 by Ensembl)
Size:
32,179 bases
Orientation:
Minus strand

Genomic View for FKBP9P1 Gene

Genes around FKBP9P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FKBP9P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FKBP9P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FKBP9P1 Gene

Proteins for FKBP9P1 Gene

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  • Protein details for FKBP9P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q75LS8-FKB9L_HUMAN
    Recommended name:
    Putative FK506-binding protein 9-like protein
    Protein Accession:
    Q75LS8
    Secondary Accessions:
    • B2R7H1

    Protein attributes for FKBP9P1 Gene

    Size:
    142 amino acids
    Molecular mass:
    15591 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FKBP9P1 Gene

Protein Expression for FKBP9P1 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Selected DME Specific Peptides for FKBP9P1 Gene

Q75LS8:
  • PGSAVLVFDI
  • MCVGEKR
  • PPHLGYG

Post-translational modifications for FKBP9P1 Gene

No Post-translational modifications

Domains & Families for FKBP9P1 Gene

Protein Domains for FKBP9P1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FKBP9P1 Gene

GenScript: Design optimal peptide antigens:
  • Putative FK506-binding protein 9-like protein (FKB9L_HUMAN)
genes like me logo Genes that share domains with FKBP9P1: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FKBP9P1 Gene

Function for FKBP9P1 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Enzyme Numbers (IUBMB) for FKBP9P1 Gene

Phenotypes From GWAS Catalog for FKBP9P1 Gene

genes like me logo Genes that share phenotypes with FKBP9P1: view

Animal Models for research

CRISPR products for research

miRNA for FKBP9P1 Gene

miRTarBase miRNAs that target FKBP9P1

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for FKBP9P1

No data available for Molecular function , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FKBP9P1 Gene

Localization for FKBP9P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FKBP9P1 Gene

Pathways & Interactions for FKBP9P1 Gene

PathCards logo

SuperPathways for FKBP9P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FKBP9P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FKBP9P1 Gene

Drugs & Compounds for FKBP9P1 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for FKBP9P1 Gene

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mRNA/cDNA for FKBP9P1 Gene

1 REFSEQ mRNAs :
5 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR products for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for FKBP9P1

Alternative Splicing Database (ASD) splice patterns (SP) for FKBP9P1 Gene

No ASD Table

Relevant External Links for FKBP9P1 Gene

GeneLoc Exon Structure for
FKBP9P1

Expression for FKBP9P1 Gene

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  1. Primer products for research
  2. Gene Expression Assays for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FKBP9P1 Gene

mRNA expression in normal human tissues for FKBP9P1 Gene
mRNA expression by GTEx for FKBP9P1 Gene

mRNA differential expression in normal tissues according to GTEx for FKBP9P1 Gene

This gene is overexpressed in Pancreas (x6.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FKBP9P1 Gene



Transcriptomic regulation report from SPP (The Signaling Pathways Project) for FKBP9P1

genes like me logo Genes that share expression patterns with FKBP9P1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FKBP9P1 Gene

Orthologs for FKBP9P1 Gene

Evolution for FKBP9P1 Gene

ENSEMBL:
Gene Tree for FKBP9P1 (if available)
TreeFam:
Gene Tree for FKBP9P1 (if available)

No data available for Orthologs for FKBP9P1 Gene

Paralogs for FKBP9P1 Gene

No data available for Paralogs for FKBP9P1 Gene

Variants for FKBP9P1 Gene

Products:

  1. SNP Genotyping and Copy Number Assays for research

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for FKBP9P1 Gene

SNP ID Clinical significance and condition Chr 07 pos Variation AA Info Type
rs11524166 - p.Val125Gly

Structural Variations from Database of Genomic Variants (DGV) for FKBP9P1 Gene

Variant ID Type Subtype PubMed ID
dgv1201e199 CNV deletion 23128226
esv2734425 CNV deletion 23290073
esv2734447 CNV deletion 23290073
esv28230 CNV gain+loss 19812545
esv3613248 CNV gain 21293372
nsv1019400 CNV gain 25217958
nsv469612 CNV loss 16826518
nsv469822 CNV gain 16826518

Additional Variant Information for FKBP9P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FKBP9P1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for FKBP9P1 Gene

Disorders for FKBP9P1 Gene

Additional Disease Information for FKBP9P1

Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for FKBP9P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FKBP9P1 Gene

Publications for FKBP9P1 Gene

  1. Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis. (PMID: 31536960) Moutaoufik MT … Babu M (iScience 2019) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4
  4. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 4
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

ExternalLinks

View latest publications for FKBP9P1 gene in Mastermind

Products for FKBP9P1 Gene

Sources for FKBP9P1 Gene