Aliases for FJ601684-411 Gene

Subcategory (RNA class) for FJ601684-411 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for FJ601684-411 Gene

No Aliases found

No data available for External Ids for FJ601684-411 Gene

Summaries for FJ601684-411 Gene

GeneCards Summary for FJ601684-411 Gene

FJ601684-411 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for FJ601684-411 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FJ601684-411 Gene

Genomics for FJ601684-411 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FJ601684-411 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J140561 Enhancer 0.2 Ensembl 600.7 +1.0 1046 0.4 FJ601684-411 LOC105378027 MG828711
GH06J140566 Enhancer 0.8 Ensembl ENCODE 0.7 -3.9 -3854 2.2 CREB1 ATF7 JUND SCRT2 CEBPB JUN FOS ATF2 ZFHX2 PRDM1 FJ601684-411 LOC105378027 lnc-HECA-10
GH06J140570 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -9.3 -9254 3.8 EED JUND CEBPB RUNX3 NFE2 FOS EP300 IKZF1 JUNB BATF FJ601684-411 LOC105378027 lnc-HECA-10
GH06J140543 Enhancer 0.8 Ensembl 0.4 +19.9 19946 0.2 BACH1 FOXA1 TCF12 IKZF2 TRIM22 PKNOX1 ARID3A DPF2 RELB RUNX3 LOC105378027 MG828711 FJ601684-411
GH06J140540 Enhancer 0.6 Ensembl 0.4 +21.5 21546 1 IKZF2 RELB BCL11A JUNB SMARCA5 IRF4 TBX21 MTA2 SPI1 IKZF1 LOC105378027 MG828711 FJ601684-411
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FJ601684-411 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FJ601684-411 Gene

Genomic Locations for FJ601684-411 Gene
chr6:140,563,023-140,563,047
(GRCh38/hg38)
Size:
25 bases
Orientation:
Minus strand

Genomic View for FJ601684-411 Gene

Genes around FJ601684-411 on UCSC Golden Path with GeneCards custom track
FJ601684-411 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

FJ601684-411 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FJ601684-411 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for FJ601684-411 Gene

Proteins for FJ601684-411 Gene

Post-translational modifications for FJ601684-411 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FJ601684-411 Gene

Domains & Families for FJ601684-411 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FJ601684-411 Gene

Function for FJ601684-411 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FJ601684-411 Gene

Localization for FJ601684-411 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FJ601684-411 Gene

Pathways & Interactions for FJ601684-411 Gene

PathCards logo

SuperPathways for FJ601684-411 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FJ601684-411 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FJ601684-411 Gene

Drugs & Compounds for FJ601684-411 Gene

No Compound Related Data Available

Transcripts for FJ601684-411 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for FJ601684-411 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000118DC9_9606 miRNA 25 1

ENA: FJ601684.1:26..50:ncRNA,

FJ601684-411 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for FJ601684-411 Gene

No ASD Table

Relevant External Links for FJ601684-411 Gene

GeneLoc Exon Structure for
FJ601684-411

No data available for mRNA/cDNA for FJ601684-411 Gene

Expression for FJ601684-411 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FJ601684-411 Gene

Orthologs for FJ601684-411 Gene

No data available for Orthologs and Evolution for FJ601684-411 Gene

Paralogs for FJ601684-411 Gene

No data available for Paralogs for FJ601684-411 Gene

Variants for FJ601684-411 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for FJ601684-411 Gene

Disorders for FJ601684-411 Gene

No disorders were found for FJ601684-411 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FJ601684-411 Gene

Publications for FJ601684-411 Gene

No publications were found for FJ601684-411 Gene.

No data available for Mastermind for FJ601684-411 Gene

Products for FJ601684-411 Gene

Sources for FJ601684-411 Gene