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Aliases for FGF2 Gene

Aliases for FGF2 Gene

  • Fibroblast Growth Factor 2 2 3 3 5
  • Fibroblast Growth Factor 2 (Basic) 2 3
  • Heparin-Binding Growth Factor 2 3 4
  • HBGF-2 3 4
  • FGF-2 3 4
  • BFGF 3 4
  • FGFB 3 4
  • Basic Fibroblast Growth Factor BFGF 3
  • Basic Fibroblast Growth Factor 4
  • Prostatropin 3

External Ids for FGF2 Gene

Previous HGNC Symbols for FGF2 Gene

  • FGFB

Previous GeneCards Identifiers for FGF2 Gene

  • GC04P124660
  • GC04P124027
  • GC04P124141
  • GC04P124206
  • GC04P124105
  • GC04P123747
  • GC04P119474

Summaries for FGF2 Gene

Entrez Gene Summary for FGF2 Gene

  • The protein encoded by this gene is a member of the fibroblast growth factor (FGF) family. FGF family members bind heparin and possess broad mitogenic and angiogenic activities. This protein has been implicated in diverse biological processes, such as limb and nervous system development, wound healing, and tumor growth. The mRNA for this gene contains multiple polyadenylation sites, and is alternatively translated from non-AUG (CUG) and AUG initiation codons, resulting in five different isoforms with distinct properties. The CUG-initiated isoforms are localized in the nucleus and are responsible for the intracrine effect, whereas, the AUG-initiated form is mostly cytosolic and is responsible for the paracrine and autocrine effects of this FGF. [provided by RefSeq, Jul 2008]

CIViC summary for FGF2 Gene

GeneCards Summary for FGF2 Gene

FGF2 (Fibroblast Growth Factor 2) is a Protein Coding gene. Diseases associated with FGF2 include Kaposi Sarcoma and Corneal Neovascularization. Among its related pathways are ERK Signaling and Akt Signaling. Gene Ontology (GO) annotations related to this gene include cytokine activity and heparin binding. An important paralog of this gene is FGF1.

UniProtKB/Swiss-Prot for FGF2 Gene

  • Acts as a ligand for FGFR1, FGFR2, FGFR3 and FGFR4 (PubMed:8663044). Also acts as an integrin ligand which is required for FGF2 signaling (PubMed:28302677). Binds to integrin ITGAV:ITGB3 (PubMed:28302677). Plays an important role in the regulation of cell survival, cell division, cell differentiation and cell migration (PubMed:8663044, PubMed:28302677). Functions as a potent mitogen in vitro (PubMed:3732516, PubMed:3964259). Can induce angiogenesis (PubMed:23469107, PubMed:28302677).

Gene Wiki entry for FGF2 Gene

Additional gene information for FGF2 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF2 Gene

Genomics for FGF2 Gene

GeneHancer (GH) Regulatory Elements for FGF2 Gene

Promoters and enhancers for FGF2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J122825 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 660.7 +0.8 795 3.8 SIN3A ZNF2 YY1 GLIS2 ZNF213 ATF7 RUNX3 SP3 YY2 JUNB FGF2 GC04P122829 CETN4P RPS26P23
GH04J122795 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 17.1 -28.6 -28556 4.5 HDAC1 PKNOX1 TAF9B ZBTB40 ZNF766 ZNF366 ATF7 RXRA CEBPB USF2 FGF2 SPATA5 NUDT6 IL21-AS1 CETN4P SPRY1 RPL34P12 LOC727709
GH04J122763 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 15.1 -61.9 -61903 4 PKNOX1 FOXA2 ARNT DMAP1 IRF4 GTF3C2 TCF12 FOS ATF7 RUNX3 SPATA5 CETN4P FGF2 ENSG00000237868 BBS12 EXOSC9 NUDT6 CCNA2 LOC727709 RPL34P12
GH04J122781 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 12.6 -43.0 -42973 4.2 FOXA2 SIN3A RFX5 YY1 ZNF143 RCOR1 FOS RUNX3 RXRA CEBPB FGF2 SPATA5 NUDT6 CETN4P SPRY1 RPL34P12 LOC727709
GH04J122699 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 10.2 -126.4 -126415 1 HDGF PKNOX1 ATF1 POLR2B ZNF766 CBX5 GATA2 ATF7 REST ZNF518A BBS12 SPATA5 EXOSC9 ENSG00000237868 FGF2 IL21-AS1 CETN4P IL21
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FGF2 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the FGF2 gene promoter:
  • AP-1
  • c-Jun
  • ATF-2
  • STAT1alpha
  • STAT1
  • STAT1beta
  • LyF-1

Genomic Locations for FGF2 Gene

Genomic Locations for FGF2 Gene
chr4:122,826,708-122,898,236
(GRCh38/hg38)
Size:
71,529 bases
Orientation:
Plus strand
chr4:123,747,863-123,819,391
(GRCh37/hg19)
Size:
71,529 bases
Orientation:
Plus strand

Genomic View for FGF2 Gene

Genes around FGF2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF2 Gene

Proteins for FGF2 Gene

  • Protein details for FGF2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P09038-FGF2_HUMAN
    Recommended name:
    Fibroblast growth factor 2
    Protein Accession:
    P09038
    Secondary Accessions:
    • A4LBB8
    • O00527
    • P78443
    • Q16443
    • Q5PY50
    • Q7KZ11
    • Q7KZ72
    • Q9UC54
    • Q9UCS5
    • Q9UCS6

    Protein attributes for FGF2 Gene

    Size:
    288 amino acids
    Molecular mass:
    30770 Da
    Quaternary structure:
    • Monomer. Homodimer. Interacts with FGFR1, FGFR2, FGFR3 and FGFR4. Affinity between fibroblast growth factors (FGFs) and their receptors is increased by heparan sulfate glycosaminoglycans that function as coreceptors. Interacts with CSPG4, FGFBP1 and TEC. Found in a complex with FGFBP1, FGF1 and FGF2. Interacts with FGFBP3 (PubMed:18669637). Interacts with integrin ITGAV:ITGB3; the interaction is required for FGF2 signaling (PubMed:28302677). Interacts with SNORC (via the extracellular domain) (By similarity).
    Miscellaneous:
    • This protein binds heparin more strongly than does aFGF.
    SequenceCaution:
    • Sequence=AAA52448.1; Type=Frameshift; Positions=25, 82, 98, 133; Evidence={ECO:0000305}; Sequence=AAB21432.2; Type=Frameshift; Positions=25; Evidence={ECO:0000305}; Sequence=AAB21432.2; Type=Miscellaneous discrepancy; Note=Unusual initiator. The initiator methionine is coded by a non-canonical CTG leucine codon.; Evidence={ECO:0000305}; Sequence=ABO43041.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=ABO43041.1; Type=Miscellaneous discrepancy; Note=Unusual initiator. The initiator methionine is coded by a non-canonical CTG leucine codon.; Evidence={ECO:0000305}; Sequence=CAA28027.1; Type=Frameshift; Positions=25, 102; Evidence={ECO:0000305}; Sequence=CAA28027.1; Type=Miscellaneous discrepancy; Note=Unusual initiator. The initiator methionine is coded by a non-canonical CTG leucine codon.; Evidence={ECO:0000305}; Sequence=CAA73868.1; Type=Frameshift; Positions=25; Evidence={ECO:0000305}; Sequence=CAA73868.1; Type=Miscellaneous discrepancy; Note=Unusual initiator. The initiator methionine is coded by a non-canonical CTG leucine codon.; Evidence={ECO:0000305}; Sequence=EAX05222.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=EAX05222.1; Type=Miscellaneous discrepancy; Note=Unusual initiator. The initiator methionine is coded by a non-canonical CTG leucine codon.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for FGF2 Gene

    Alternative splice isoforms for FGF2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FGF2 Gene

Post-translational modifications for FGF2 Gene

  • Phosphorylation at Tyr-215 regulates FGF2 unconventional secretion.
  • Several N-termini starting at positions 94, 125, 126, 132, 143 and 162 have been identified by direct sequencing.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FGF2 Gene

Antibody Products

  • Abcam antibodies for FGF2

No data available for DME Specific Peptides for FGF2 Gene

Domains & Families for FGF2 Gene

Gene Families for FGF2 Gene

HGNC:
Human Protein Atlas (HPA):
  • Cancer-related genes
  • Candidate cardiovascular disease genes
  • FDA approved drug targets
  • Predicted intracellular proteins

Suggested Antigen Peptide Sequences for FGF2 Gene

Graphical View of Domain Structure for InterPro Entry

P09038

UniProtKB/Swiss-Prot:

FGF2_HUMAN :
  • Belongs to the heparin-binding growth factors family.
Family:
  • Belongs to the heparin-binding growth factors family.
genes like me logo Genes that share domains with FGF2: view

Function for FGF2 Gene

Molecular function for FGF2 Gene

UniProtKB/Swiss-Prot Function:
Acts as a ligand for FGFR1, FGFR2, FGFR3 and FGFR4 (PubMed:8663044). Also acts as an integrin ligand which is required for FGF2 signaling (PubMed:28302677). Binds to integrin ITGAV:ITGB3 (PubMed:28302677). Plays an important role in the regulation of cell survival, cell division, cell differentiation and cell migration (PubMed:8663044, PubMed:28302677). Functions as a potent mitogen in vitro (PubMed:3732516, PubMed:3964259). Can induce angiogenesis (PubMed:23469107, PubMed:28302677).
UniProtKB/Swiss-Prot BiophysicochemicalProperties:
pH dependence: Retains almost half of its activity after treatment at pH 2.0 for 3 hours at 20 degrees Celsius. {ECO:0000269 PubMed:1721615}; Temperature dependence: Inactivated after 3 minutes at 60 degrees Celsius or 1 minute at 80 degrees Celsius. {ECO:0000269 PubMed:1721615};
GENATLAS Biochemistry:
fibroblast growth factor 2,basic,multifunctional protein,144kDa,expressed by brain,retina cartilage,inducer of anteroposterior neural pattern,essential for FGF8 and FGF10 reciprocal regulation loop in limb induction in mouse. FGF2 expression is under the control of an antisense transcript (see NUDT6)

LifeMap Function Summary for FGF2 Gene

It affects the following cells:
FGF2 as growth factor is involved in stem cell differentiation protocols towards the derivation of the following cells:

Phenotypes From GWAS Catalog for FGF2 Gene

Gene Ontology (GO) - Molecular Function for FGF2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004713 protein tyrosine kinase activity TAS --
GO:0005088 Ras guanyl-nucleotide exchange factor activity TAS --
GO:0005104 fibroblast growth factor receptor binding IPI 2161540
GO:0005125 cytokine activity IDA 18059339
GO:0005178 integrin binding IDA 28302677
genes like me logo Genes that share ontologies with FGF2: view
genes like me logo Genes that share phenotypes with FGF2: view

Animal Models for FGF2 Gene

MGI Knock Outs for FGF2:

Animal Model Products

  • Taconic Biosciences Mouse Models for FGF2

miRNA for FGF2 Gene

miRTarBase miRNAs that target FGF2

Clone Products

  • Addgene plasmids for FGF2

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for FGF2 Gene

Localization for FGF2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for FGF2 Gene

Secreted. Nucleus. Note=Exported from cells by an endoplasmic reticulum (ER)/Golgi-independent mechanism. Unconventional secretion of FGF2 occurs by direct translocation across the plasma membrane. Binding of exogenous FGF2 to FGFR facilitates endocytosis followed by translocation of FGF2 across endosomal membrane into the cytosol. Nuclear import from the cytosol requires the classical nuclear import machinery, involving proteins KPNA1 and KPNB1, as well as CEP57.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for FGF2 gene
Compartment Confidence
extracellular 5
nucleus 5
cytoskeleton 3
cytosol 3
plasma membrane 2
mitochondrion 2
endoplasmic reticulum 2
lysosome 1
golgi apparatus 1
endosome 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nuclear bodies (3)
  • Nucleoplasm (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for FGF2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005615 extracellular space IDA 2161540
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with FGF2: view

Pathways & Interactions for FGF2 Gene

SuperPathway Contained pathways
1 RET signaling
2 Downstream signaling of activated FGFR2
3 Apoptotic Pathways in Synovial Fibroblasts
4 Negative regulation of FGFR1 signaling
5 GPCR Pathway
genes like me logo Genes that share pathways with FGF2: view

SIGNOR curated interactions for FGF2 Gene

Gene Ontology (GO) - Biological Process for FGF2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000165 MAPK cascade TAS --
GO:0000187 activation of MAPK activity TAS 9712850
GO:0001525 angiogenesis IEA --
GO:0001658 branching involved in ureteric bud morphogenesis IDA 12631064
GO:0001938 positive regulation of endothelial cell proliferation IDA,IMP 18059339
genes like me logo Genes that share ontologies with FGF2: view

Drugs & Compounds for FGF2 Gene

(87) Drugs for FGF2 Gene - From: DrugBank, PharmGKB, ClinicalTrials, DGIdb, HMDB, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Pentosan Polysulfate Approved Pharma inhibitor, Target, antagonist 0
Sirolimus Approved, Investigational Pharma inhibitor, Target, other/unknown Kinase Inhibitors, Mammalian target of rapamycin (mTOR) inhibitors 2011
Heparin Approved, Investigational Pharma Antagonist, Target 905
Sucralfate Approved Pharma Target, agonist 12
Thalidomide Approved, Investigational, Withdrawn Pharma Immunomodulatory agent,sedative drug,angiogenesis inhibitor, Immunomodulatory agents, TNF-alpha synthesis inhibitor 1195

(46) Additional Compounds for FGF2 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with FGF2: view

Transcripts for FGF2 Gene

mRNA/cDNA for FGF2 Gene

(2) REFSEQ mRNAs :
(11) Additional mRNA sequences :
(192) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FGF2 Gene

Fibroblast growth factor 2 (basic):
Representative Sequences:

Clone Products

  • Addgene plasmids for FGF2

Alternative Splicing Database (ASD) splice patterns (SP) for FGF2 Gene

No ASD Table

Relevant External Links for FGF2 Gene

GeneLoc Exon Structure for
FGF2
ECgene alternative splicing isoforms for
FGF2

Expression for FGF2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery