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Aliases for FGF14-AS2 Gene

Subcategory (RNA class) for FGF14-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for FGF14-AS2 Gene

  • FGF14 Antisense RNA 2 2 3 5

External Ids for FGF14-AS2 Gene

ORGUL Members for FGF14-AS2 Gene

Previous GeneCards Identifiers for FGF14-AS2 Gene

  • GC13P103047

Summaries for FGF14-AS2 Gene

GeneCards Summary for FGF14-AS2 Gene

FGF14-AS2 (FGF14 Antisense RNA 2) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for FGF14-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF14-AS2 Gene

Genomics for FGF14-AS2 Gene

GeneHancer (GH) Regulatory Elements for FGF14-AS2 Gene

Promoters and enhancers for FGF14-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I102393 Promoter/Enhancer 1.4 Ensembl ENCODE 571.1 +0.1 60 1.9 ATF1 SIN3A YY1 ETS1 E2F8 ZNF143 ZNF207 RUNX3 YY2 REST FGF14-AS2 FGF14-IT1 GC13P102395 FGF14-AS1 FGF14
GH13I102399 Enhancer 1.1 FANTOM5 Ensembl ENCODE 7.7 +5.7 5664 1.8 TAF1 SIN3A ZIC2 RAD21 ZFHX2 POLR2A ZFP36 HNF4A EGR2 EZH2 FGF14 FGF14-AS2 BIVM GC13P102395
GH13I102317 Enhancer 0.7 ENCODE 5.6 -76.7 -76749 1.2 FOXA2 TAF1 MAX RAD21 YY1 POLR2A HNF4G RCOR1 CHD2 RXRA FGF14-AS2 GC13P102315 FGF14-AS1 FGF14-IT1 FGF14
GH13I102198 Enhancer 0.6 ENCODE 4.5 -195.5 -195491 1.2 FOXA2 JUND ATF3 JUN STAT3 CEBPB FOS HNF4A EP300 YY1 FGF14-AS2 RPL39P29 GC13P102111 FGF14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FGF14-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FGF14-AS2 Gene

Genomic Locations for FGF14-AS2 Gene
chr13:102,394,578-102,395,705
(GRCh38/hg38)
Size:
1,128 bases
Orientation:
Plus strand
chr13:103,046,928-103,048,055
(GRCh37/hg19)

Genomic View for FGF14-AS2 Gene

Genes around FGF14-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF14-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF14-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF14-AS2 Gene

Proteins for FGF14-AS2 Gene

Post-translational modifications for FGF14-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF14-AS2 Gene

Domains & Families for FGF14-AS2 Gene

Gene Families for FGF14-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FGF14-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF14-AS2 Gene

Function for FGF14-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF14-AS2 Gene

Localization for FGF14-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FGF14-AS2 Gene

Pathways & Interactions for FGF14-AS2 Gene

SuperPathways for FGF14-AS2 Gene

No Data Available

Interacting Proteins for FGF14-AS2 Gene

Gene Ontology (GO) - Biological Process for FGF14-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FGF14-AS2 Gene

Drugs & Compounds for FGF14-AS2 Gene

No Compound Related Data Available

Transcripts for FGF14-AS2 Gene

mRNA/cDNA for FGF14-AS2 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FGF14-AS2 Gene

FGF14 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FGF14-AS2 Gene

No ASD Table

Relevant External Links for FGF14-AS2 Gene

GeneLoc Exon Structure for
FGF14-AS2
ECgene alternative splicing isoforms for
FGF14-AS2

Expression for FGF14-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF14-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for FGF14-AS2 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.1).

SOURCE GeneReport for Unigene cluster for FGF14-AS2 Gene:

Hs.646604
genes like me logo Genes that share expression patterns with FGF14-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF14-AS2 Gene

Orthologs for FGF14-AS2 Gene

Evolution for FGF14-AS2 Gene

ENSEMBL:
Gene Tree for FGF14-AS2 (if available)
TreeFam:
Gene Tree for FGF14-AS2 (if available)

No data available for Orthologs for FGF14-AS2 Gene

Paralogs for FGF14-AS2 Gene

No data available for Paralogs for FGF14-AS2 Gene

Variants for FGF14-AS2 Gene

Sequence variations from dbSNP and Humsavar for FGF14-AS2 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000341232 -- 102,393,208(+) T/C upstream_transcript_variant
rs1000775960 -- 102,392,881(+) G/A upstream_transcript_variant
rs1001502167 -- 102,395,339(+) A/G non_coding_transcript_variant
rs1001792997 -- 102,394,199(+) C/T upstream_transcript_variant
rs1001901759 -- 102,394,947(+) G/A non_coding_transcript_variant

Additional Variant Information for FGF14-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FGF14-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FGF14-AS2 Gene

Disorders for FGF14-AS2 Gene

Additional Disease Information for FGF14-AS2

No disorders were found for FGF14-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF14-AS2 Gene

Publications for FGF14-AS2 Gene

  1. A novel long non-coding RNA FGF14-AS2 is correlated with progression and prognosis in breast cancer. (PMID: 26820525) Yang F … Wang OC (Biochemical and biophysical research communications 2016) 2 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian SL … Gershon ES (Genomics 2002) 3 58
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for FGF14-AS2 Gene

Sources for FGF14-AS2 Gene

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