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Aliases for FGF10-AS1 Gene

Subcategory (RNA class) for FGF10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FGF10-AS1 Gene

  • FGF10 Antisense RNA 1 2 3 5

External Ids for FGF10-AS1 Gene

Summaries for FGF10-AS1 Gene

GeneCards Summary for FGF10-AS1 Gene

FGF10-AS1 (FGF10 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FGF10-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF10-AS1 Gene

Genomics for FGF10-AS1 Gene

GeneHancer (GH) Regulatory Elements for FGF10-AS1 Gene

Promoters and enhancers for FGF10-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I044387 Promoter/Enhancer 2.1 VISTA EPDnew Ensembl ENCODE 550.8 +0.4 408 2.5 ZFHX2 SIN3A PRDM10 PRDM1 EZH2 EGR2 FGF10-AS1 FGF10
GH05I043554 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.8 -832.4 -832358 3.2 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF143 SP3 REST SMARCB1 PAIP1 NNT C5orf34 ENSG00000249492 ENSG00000248240 EEF1A1P19 NNT-AS1 RPL29P12 FGF10-AS1 LOC153684
GH05I043771 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10 -615.6 -615589 2.7 ATF1 ARNT ZNF766 FOS ATF7 CAVIN1 ZNF518A ZNF592 MEF2D ATF4 TMEM267 NNT-AS1 ZNF131 FGF10-AS1 NNT ENSG00000249276 RPL29P12
GH05I044603 Enhancer 0.2 ENCODE 10.7 +214.9 214922 0.2 FGF10 FGF10-AS1 GC05P044546 LINC02224 GC05M044556
GH05I044392 Enhancer 0.5 UCNEbase 0.8 +3.4 3397 0.2 MAFK FGF10-AS1 FGF10 GC05P044486
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FGF10-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FGF10-AS1 Gene

Genomic Locations for FGF10-AS1 Gene
25,258 bases
Plus strand

Genomic View for FGF10-AS1 Gene

Genes around FGF10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF10-AS1 Gene

Proteins for FGF10-AS1 Gene

Post-translational modifications for FGF10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF10-AS1 Gene

Domains & Families for FGF10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF10-AS1 Gene

Function for FGF10-AS1 Gene

Phenotypes From GWAS Catalog for FGF10-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF10-AS1 Gene

Localization for FGF10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FGF10-AS1 Gene

Pathways & Interactions for FGF10-AS1 Gene

SuperPathways for FGF10-AS1 Gene

No Data Available

Interacting Proteins for FGF10-AS1 Gene

Gene Ontology (GO) - Biological Process for FGF10-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FGF10-AS1 Gene

Drugs & Compounds for FGF10-AS1 Gene

No Compound Related Data Available

Transcripts for FGF10-AS1 Gene

mRNA/cDNA for FGF10-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FGF10-AS1 Gene

No ASD Table

Relevant External Links for FGF10-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FGF10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FGF10-AS1 Gene

This gene is overexpressed in Cervix - Endocervix (x5.0), Cervix - Ectocervix (x4.7), and Adipose - Visceral (Omentum) (x4.3).
genes like me logo Genes that share expression patterns with FGF10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF10-AS1 Gene

Orthologs for FGF10-AS1 Gene

Evolution for FGF10-AS1 Gene

Gene Tree for FGF10-AS1 (if available)
Gene Tree for FGF10-AS1 (if available)

No data available for Orthologs for FGF10-AS1 Gene

Paralogs for FGF10-AS1 Gene

No data available for Paralogs for FGF10-AS1 Gene

Variants for FGF10-AS1 Gene

Sequence variations from dbSNP and Humsavar for FGF10-AS1 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs104893885 pathogenic, Levy-Hollister syndrome 44,388,366(+) C/A upstream_transcript_variant
rs104893888 pathogenic, Congenital absence of salivary gland 44,388,443(+) T/G upstream_transcript_variant
rs545941601 likely-benign, Levy-Hollister syndrome, Congenital absence of salivary gland 44,388,422(+) C/T upstream_transcript_variant
rs886060654 uncertain-significance, Levy-Hollister syndrome, Congenital absence of salivary gland 44,388,497(+) G/A/C/T upstream_transcript_variant
rs886060655 uncertain-significance, Levy-Hollister syndrome, Congenital absence of salivary gland 44,388,539(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for FGF10-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv830277 CNV gain 17160897

Additional Variant Information for FGF10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FGF10-AS1 Gene

Disorders for FGF10-AS1 Gene

Additional Disease Information for FGF10-AS1

No disorders were found for FGF10-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF10-AS1 Gene

Publications for FGF10-AS1 Gene

  1. Integrated analysis of dysregulated lncRNA expression in fetal cardiac tissues with ventricular septal defect. (PMID: 24147006) Song G … Qian L (PloS one 2013) 2 3 58

Products for FGF10-AS1 Gene

Sources for FGF10-AS1 Gene

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