Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FER1L6-AS2 Gene

Subcategory (RNA class) for FER1L6-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FER1L6-AS2 Gene

  • FER1L6 Antisense RNA 2 2 3 4 5
  • FER1L6 Antisense RNA 2 (Non-Protein Coding) 2 3
  • C8orf78 3 4
  • Chromosome 8 Open Reading Frame 78 2
  • FER1L6 Antisense Gene Protein 2 4

External Ids for FER1L6-AS2 Gene

Previous HGNC Symbols for FER1L6-AS2 Gene

  • C8orf78

Previous GeneCards Identifiers for FER1L6-AS2 Gene

  • GC08M125061

Summaries for FER1L6-AS2 Gene

GeneCards Summary for FER1L6-AS2 Gene

FER1L6-AS2 (FER1L6 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FER1L6-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FER1L6-AS2 Gene

Genomics for FER1L6-AS2 Gene

GeneHancer (GH) Regulatory Elements for FER1L6-AS2 Gene

Promoters and enhancers for FER1L6-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I124270 Enhancer 1.2 Ensembl ENCODE 10.7 -100.0 -100012 3 PKNOX1 FOXA2 SIN3A FEZF1 ZNF766 FOS DEK ZC3H11A REST ZNF592 ENSG00000253227 WASHC5-AS1 FAM91A1 ENSG00000253106 TRMT12 FER1L6-AS2 RNF139-AS1 RNU6-756P
GH08I124246 Enhancer 1 Ensembl ENCODE 10.7 -76.0 -75977 1.5 HDGF ATF1 PKNOX1 KLF17 SIN3A RAD21 SCRT2 ATF7 FOS RUNX3 LOC101927588 TRMT12 FER1L6-AS2 WASHC5-AS1 GC08P124263
GH08I124140 Enhancer 0.8 Ensembl ENCODE 12.8 +30.2 30230 1.3 SMAD5 GTF2E2 BATF ATF2 IRF4 ZNF121 POLR2A NFATC1 FOS RUNX3 LOC392268 TMEM65 FER1L6-AS2 FER1L6-AS1 ENSG00000254249 GC08M124136 GC08M124076
GH08I124228 Enhancer 0.9 ENCODE 10.4 -57.2 -57186 1.4 HDAC1 ZBTB7B RFX5 EGR1 FOS ATF7 SMARCA5 CEBPB ZEB2 ZNF623 TRMT12 WASHC5-AS1 FAM91A1 RNU6-756P RNF139 FER1L6-AS2 LOC101927588
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FER1L6-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FER1L6-AS2 Gene

Genomic Locations for FER1L6-AS2 Gene
125,452 bases
Minus strand

Genomic View for FER1L6-AS2 Gene

Genes around FER1L6-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FER1L6-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FER1L6-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FER1L6-AS2 Gene

Proteins for FER1L6-AS2 Gene

  • Protein details for FER1L6-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein encoded by FER1L6-AS2
    Protein Accession:

    Protein attributes for FER1L6-AS2 Gene

    137 amino acids
    Molecular mass:
    15528 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FER1L6-AS2 Gene

Post-translational modifications for FER1L6-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FER1L6-AS2 Gene

Domains & Families for FER1L6-AS2 Gene

Protein Domains for FER1L6-AS2 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FER1L6-AS2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FER1L6-AS2 Gene

Function for FER1L6-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FER1L6-AS2 Gene

Localization for FER1L6-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FER1L6-AS2 Gene

Pathways & Interactions for FER1L6-AS2 Gene

SuperPathways for FER1L6-AS2 Gene

No Data Available

Interacting Proteins for FER1L6-AS2 Gene

Gene Ontology (GO) - Biological Process for FER1L6-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for FER1L6-AS2 Gene

Drugs & Compounds for FER1L6-AS2 Gene

No Compound Related Data Available

Transcripts for FER1L6-AS2 Gene

mRNA/cDNA for FER1L6-AS2 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FER1L6-AS2 Gene

FER1L6 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FER1L6-AS2 Gene

No ASD Table

Relevant External Links for FER1L6-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FER1L6-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FER1L6-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for FER1L6-AS2 Gene

This gene is overexpressed in Testis (x18.0), Brain - Amygdala (x6.7), and Brain - Caudate (basal ganglia) (x5.8).

SOURCE GeneReport for Unigene cluster for FER1L6-AS2 Gene:

genes like me logo Genes that share expression patterns with FER1L6-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FER1L6-AS2 Gene

Orthologs for FER1L6-AS2 Gene

Evolution for FER1L6-AS2 Gene

Gene Tree for FER1L6-AS2 (if available)
Gene Tree for FER1L6-AS2 (if available)

No data available for Orthologs for FER1L6-AS2 Gene

Paralogs for FER1L6-AS2 Gene

No data available for Paralogs for FER1L6-AS2 Gene

Variants for FER1L6-AS2 Gene

Sequence variations from dbSNP and Humsavar for FER1L6-AS2 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000014015 -- 124,055,176(-) C/A/T intron_variant
rs1000039953 -- 124,172,802(-) C/A upstream_transcript_variant
rs1000065553 -- 124,062,335(-) T/C intron_variant
rs1000071451 -- 124,106,601(-) A/T intron_variant
rs1000097096 -- 124,154,839(-) G/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FER1L6-AS2 Gene

Variant ID Type Subtype PubMed ID
esv1001834 CNV insertion 20482838
esv1609725 CNV insertion 17803354
esv23245 CNV loss 19812545
esv2673519 CNV deletion 23128226
esv2762769 CNV gain 21179565
esv3306706 CNV mobile element insertion 20981092
esv3309379 CNV mobile element insertion 20981092
esv3310430 CNV novel sequence insertion 20981092
esv3344858 CNV insertion 20981092
esv3359343 CNV insertion 20981092
esv3401229 CNV insertion 20981092
esv3618679 CNV loss 21293372
esv3618680 CNV loss 21293372
esv3618682 CNV loss 21293372
esv3618683 CNV loss 21293372
esv3618684 CNV loss 21293372
nsv1023183 CNV loss 25217958
nsv1124375 CNV deletion 24896259
nsv396418 CNV insertion 16902084
nsv397298 CNV insertion 16902084
nsv510985 OTHER complex 20534489
nsv612144 CNV loss 21841781
nsv6375 CNV deletion 18451855
nsv831452 CNV gain 17160897

Additional Variant Information for FER1L6-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FER1L6-AS2 Gene

Disorders for FER1L6-AS2 Gene

Additional Disease Information for FER1L6-AS2

No disorders were found for FER1L6-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FER1L6-AS2 Gene

Publications for FER1L6-AS2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C … Lander ES (Nature 2006) 4 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FER1L6-AS2 Gene

Sources for FER1L6-AS2 Gene

Loading form....