Aliases for FDPSP9 Gene

Aliases for FDPSP9 Gene

  • Farnesyl Diphosphate Synthase Pseudogene 9 2 3
  • Farnesyl Diphosphate Synthase (Farnesyl Pyrophosphate Synthetase, Dimethylallyltranstransferase, Geranyltranstransferase) Pseudogene 3
  • Farnesyl Diphosphate Synthase (FDRS) Pseudogene 5
  • AC015871.1 5

External Ids for FDPSP9 Gene

Previous GeneCards Identifiers for FDPSP9 Gene

  • GC15P080237

Summaries for FDPSP9 Gene

GeneCards Summary for FDPSP9 Gene

FDPSP9 (Farnesyl Diphosphate Synthase Pseudogene 9) is a Pseudogene.

Additional gene information for FDPSP9 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FDPSP9 Gene

Genomics for FDPSP9 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FDPSP9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J079942 Enhancer 0.9 Ensembl ENCODE 600.7 -0.9 -943 3.8 CREB1 ATF7 RFX5 IKZF2 TRIM22 ARID3A DPF2 RELB CTBP1 RUNX3 FDPSP9 lnc-ZFAND6-2 ST20 BCL2A1 MTHFS ST20-MTHFS piR-58297-182
GH15J079929 Enhancer 0.5 Ensembl 0.4 -12.8 -12843 4.8 ZNF512 IKZF1 HMBOX1 MCM5 FOSL1 MCM7 ZNF366 ZNF664 MTHFS ST20 BCL2A1 ZFAND6 piR-58297-182 ST20-MTHFS FDPSP9
GH15J079935 Enhancer 0.3 Ensembl 0.4 -8.6 -8643 0.8 IKZF1 MTHFS ST20 BCL2A1 FDPSP9 piR-58297-182 ST20-MTHFS
GH15J079934 Enhancer 0.3 Ensembl 0.4 -10.1 -10143 0.2 HLF BCL2A1 piR-58297-182 FDPSP9 ST20-MTHFS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FDPSP9 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FDPSP9 Gene

Genomic Locations for FDPSP9 Gene
chr15:79,944,444-79,945,632
(GRCh38/hg38)
Size:
1,189 bases
Orientation:
Plus strand
chr15:80,236,834-80,237,974
(GRCh37/hg19)
Size:
1,141 bases
Orientation:
Plus strand

Genomic View for FDPSP9 Gene

Genes around FDPSP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FDPSP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FDPSP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FDPSP9 Gene

Proteins for FDPSP9 Gene

Post-translational modifications for FDPSP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FDPSP9 Gene

Domains & Families for FDPSP9 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FDPSP9 Gene

Function for FDPSP9 Gene

Phenotypes From GWAS Catalog for FDPSP9 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FDPSP9 Gene

Localization for FDPSP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FDPSP9 Gene

Pathways & Interactions for FDPSP9 Gene

PathCards logo

SuperPathways for FDPSP9 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FDPSP9 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FDPSP9 Gene

Drugs & Compounds for FDPSP9 Gene

No Compound Related Data Available

Transcripts for FDPSP9 Gene

mRNA/cDNA for FDPSP9 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FDPSP9 Gene

No ASD Table

Relevant External Links for FDPSP9 Gene

GeneLoc Exon Structure for
FDPSP9

Expression for FDPSP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FDPSP9 Gene

mRNA differential expression in normal tissues according to GTEx for FDPSP9 Gene

This gene is overexpressed in Liver (x31.2) and Whole Blood (x10.0).
genes like me logo Genes that share expression patterns with FDPSP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FDPSP9 Gene

Orthologs for FDPSP9 Gene

Evolution for FDPSP9 Gene

ENSEMBL:
Gene Tree for FDPSP9 (if available)
TreeFam:
Gene Tree for FDPSP9 (if available)

No data available for Orthologs for FDPSP9 Gene

Paralogs for FDPSP9 Gene

No data available for Paralogs for FDPSP9 Gene

Variants for FDPSP9 Gene

Additional Variant Information for FDPSP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FDPSP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FDPSP9 Gene

Disorders for FDPSP9 Gene

No disorders were found for FDPSP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FDPSP9 Gene

Publications for FDPSP9 Gene

No publications were found for FDPSP9 Gene.

No data available for Mastermind for FDPSP9 Gene

Products for FDPSP9 Gene

Sources for FDPSP9 Gene