Aliases for FDPSP8 Gene

Aliases for FDPSP8 Gene

  • Farnesyl Diphosphate Synthase Pseudogene 8 2 3 5
  • Farnesyl Diphosphate Synthase (Farnesyl Pyrophosphate Synthetase, Dimethylallyltranstransferase, Geranyltranstransferase) Pseudogene 3
  • FDPSP8 5

External Ids for FDPSP8 Gene

Previous GeneCards Identifiers for FDPSP8 Gene

  • GC01M211837

Summaries for FDPSP8 Gene

GeneCards Summary for FDPSP8 Gene

FDPSP8 (Farnesyl Diphosphate Synthase Pseudogene 8) is a Pseudogene.

Additional gene information for FDPSP8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FDPSP8 Gene

Genomics for FDPSP8 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FDPSP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J211652 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +7.3 7310 3.6 GATAD2A CTCF PRDM10 TFE3 JUND ZNF143 ZSCAN4 RXRB REST RAD21 PACC1 SLC30A1 FDPSP8 ENSG00000228792 LINC01693 NEK2
GH01J211646 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.7 12666 4.7 TFE3 ZNF512 NFKBIZ CTCF JUND MTA2 RXRB REST RAD21 TRIM22 SNORA16B SLC30A1 ENSG00000223649 RD3 TRAF5 NEK2 ENSG00000231057 ENSG00000229832 ENSG00000228792 LINC01693
GH01J211667 Enhancer 0.8 ENCODE 0.4 -6.1 -6055 0.1 GATAD2A SOX13 RCOR2 RXRB IRF2 HDAC1 GABPA SOX6 CEBPA KMT2B SLC30A1 ENSG00000212187 FDPSP8 NEK2 lnc-LPGAT1-3
GH01J211671 Enhancer 0.3 Ensembl 0.4 -10.7 -10702 0.4 FEZF1 SP7 SLC30A1 NEK2 lnc-LPGAT1-3 FDPSP8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FDPSP8 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FDPSP8 Gene

Genomic Locations for FDPSP8 Gene
chr1:211,660,133-211,661,299
(GRCh38/hg38)
Size:
1,167 bases
Orientation:
Minus strand
chr1:211,833,475-211,834,624
(GRCh37/hg19)
Size:
1,150 bases
Orientation:
Minus strand

Genomic View for FDPSP8 Gene

Genes around FDPSP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FDPSP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FDPSP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FDPSP8 Gene

Proteins for FDPSP8 Gene

Post-translational modifications for FDPSP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FDPSP8 Gene

Domains & Families for FDPSP8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FDPSP8 Gene

Function for FDPSP8 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FDPSP8 Gene

Localization for FDPSP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FDPSP8 Gene

Pathways & Interactions for FDPSP8 Gene

PathCards logo

SuperPathways for FDPSP8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FDPSP8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FDPSP8 Gene

Drugs & Compounds for FDPSP8 Gene

No Compound Related Data Available

Transcripts for FDPSP8 Gene

mRNA/cDNA for FDPSP8 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FDPSP8 Gene

No ASD Table

Relevant External Links for FDPSP8 Gene

GeneLoc Exon Structure for
FDPSP8

Expression for FDPSP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FDPSP8 Gene

mRNA differential expression in normal tissues according to GTEx for FDPSP8 Gene

This gene is overexpressed in Testis (x19.4).
genes like me logo Genes that share expression patterns with FDPSP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FDPSP8 Gene

Orthologs for FDPSP8 Gene

Evolution for FDPSP8 Gene

ENSEMBL:
Gene Tree for FDPSP8 (if available)
TreeFam:
Gene Tree for FDPSP8 (if available)

No data available for Orthologs for FDPSP8 Gene

Paralogs for FDPSP8 Gene

No data available for Paralogs for FDPSP8 Gene

Variants for FDPSP8 Gene

Additional Variant Information for FDPSP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FDPSP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FDPSP8 Gene

Disorders for FDPSP8 Gene

No disorders were found for FDPSP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FDPSP8 Gene

Publications for FDPSP8 Gene

No publications were found for FDPSP8 Gene.

No data available for Mastermind for FDPSP8 Gene

Products for FDPSP8 Gene

Sources for FDPSP8 Gene