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Aliases for FDPSP2 Gene

Aliases for FDPSP2 Gene

  • Farnesyl Diphosphate Synthase Pseudogene 2 2 3 5
  • Farnesyl Diphosphate Synthase-Like 2A (Farnesyl Pyrophosphate Synthetase-Like 2A) 2 3
  • Farnesyl Diphosphate Synthase-Like 2 (Farnesyl Pyrophosphate Synthetase-Like 2) 2 3
  • TCAG_1641456 3
  • FDPSL2A 3
  • FDPSL2 3
  • FPSL2 3

External Ids for FDPSP2 Gene

Previous HGNC Symbols for FDPSP2 Gene

  • FPSL2
  • FDPSL2

Previous GeneCards Identifiers for FDPSP2 Gene

  • GC07M076101

Summaries for FDPSP2 Gene

GeneCards Summary for FDPSP2 Gene

FDPSP2 (Farnesyl Diphosphate Synthase Pseudogene 2) is a Pseudogene.

Additional gene information for FDPSP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FDPSP2 Gene

Genomics for FDPSP2 Gene

GeneHancer (GH) Regulatory Elements for FDPSP2 Gene

Promoters and enhancers for FDPSP2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I076473 Enhancer 0.2 dbSUPER 550.8 +0.3 293 1.4 FDPSP2 GC07P076476 UPK3B POMZP3 LOC100133091 ZP3 ENSG00000250614 DTX2
GH07I076461 Promoter/Enhancer 1.3 EPDnew Ensembl dbSUPER 0.4 +12.9 12899 1.4 GABPB1 DTX2 FDPSP2
GH07I076467 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +6.9 6903 0.9 HDGF IKZF1 SIN3A DTX2 FDPSP2
GH07I076466 Enhancer 0.4 Ensembl dbSUPER 0.4 +8.3 8299 0.2 DTX2 FDPSP2
GH07I076463 Enhancer 0.3 dbSUPER 0.4 +10.6 10590 2.4 MLLT1 UPK3B DTX2 FDPSP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FDPSP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FDPSP2 Gene

Genomic Locations for FDPSP2 Gene
4,981 bases
Minus strand

Genomic View for FDPSP2 Gene

Genes around FDPSP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FDPSP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FDPSP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FDPSP2 Gene

Proteins for FDPSP2 Gene

Post-translational modifications for FDPSP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FDPSP2 Gene

Domains & Families for FDPSP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FDPSP2 Gene

Function for FDPSP2 Gene

Phenotypes for FDPSP2 Gene

genes like me logo Genes that share phenotypes with FDPSP2: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FDPSP2 Gene

Localization for FDPSP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FDPSP2 Gene

Pathways & Interactions for FDPSP2 Gene

SuperPathways for FDPSP2 Gene

No Data Available

Interacting Proteins for FDPSP2 Gene

Gene Ontology (GO) - Biological Process for FDPSP2 Gene


No data available for Pathways by source and SIGNOR curated interactions for FDPSP2 Gene

Drugs & Compounds for FDPSP2 Gene

(1) Drugs for FDPSP2 Gene - From: ApexBio

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Alendronate Approved Pharma Inhibition, Inhibitor Bone resorption inhibitor, Osteoclast function modifiers (important in bone metastasis) 165

(1) ApexBio Compounds for FDPSP2 Gene

Compound Action Cas Number
Alendronate Bone resorption inhibitor 121268-17-5
genes like me logo Genes that share compounds with FDPSP2: view

Drug Products

Transcripts for FDPSP2 Gene

mRNA/cDNA for FDPSP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FDPSP2 Gene

No ASD Table

Relevant External Links for FDPSP2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FDPSP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FDPSP2 Gene

mRNA differential expression in normal tissues according to GTEx for FDPSP2 Gene

This gene is overexpressed in Esophagus - Mucosa (x6.0), Whole Blood (x4.8), and Minor Salivary Gland (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of FDPSP2 Gene:

genes like me logo Genes that share expression patterns with FDPSP2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FDPSP2 Gene

Orthologs for FDPSP2 Gene

Evolution for FDPSP2 Gene

Gene Tree for FDPSP2 (if available)
Gene Tree for FDPSP2 (if available)

No data available for Orthologs for FDPSP2 Gene

Paralogs for FDPSP2 Gene

No data available for Paralogs for FDPSP2 Gene

Variants for FDPSP2 Gene

Sequence variations from dbSNP and Humsavar for FDPSP2 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1001256708 -- 76,469,559(-) A/C downstream_transcript_variant
rs1001858343 -- 76,472,576(-) C/A non_coding_transcript_variant
rs1001924934 -- 76,472,102(-) A/G non_coding_transcript_variant
rs1002934825 -- 76,474,498(-) C/G non_coding_transcript_variant
rs1003944336 -- 76,476,232(-) C/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for FDPSP2 Gene

Variant ID Type Subtype PubMed ID
dgv120n16 CNV deletion 17901297
dgv1218e199 CNV deletion 23128226
dgv21n31 CNV gain 19718026
dgv232e55 CNV gain 17911159
dgv233e55 CNV loss 17911159
dgv234e55 CNV gain 17911159
dgv235e55 CNV loss 17911159
dgv6470n100 CNV loss 25217958
dgv6471n100 CNV gain 25217958
dgv6472n100 CNV loss 25217958
dgv6473n100 CNV gain 25217958
dgv6474n100 CNV loss 25217958
dgv6475n100 CNV gain 25217958
dgv6476n100 CNV gain 25217958
esv23516 CNV gain 19812545
esv2422494 CNV duplication 17116639
esv2734687 CNV deletion 23290073
esv2761124 CNV gain 21179565
esv2764008 CNV gain+loss 21179565
esv33074 CNV gain 17666407
nsv1034692 CNV gain+loss 25217958
nsv428174 CNV gain 18775914
nsv471446 CNV gain 19718026
nsv482106 CNV gain 20164927
nsv517634 CNV gain+loss 19592680
nsv528969 CNV gain 19592680
nsv607585 CNV gain 21841781
nsv7403 OTHER inversion 18451855
nsv970894 CNV duplication 23825009
nsv981537 CNV duplication 23825009

Additional Variant Information for FDPSP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FDPSP2 Gene

Disorders for FDPSP2 Gene

Additional Disease Information for FDPSP2

No disorders were found for FDPSP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FDPSP2 Gene

Publications for FDPSP2 Gene

  1. Dispersed family of human genes with sequence similarity to farnesyl pyrophosphate synthetase. (PMID: 2613235) Heinzmann C … Lusis AJ (Genomics 1989) 2 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 58

Products for FDPSP2 Gene

Sources for FDPSP2 Gene

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