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Aliases for FAUP1 Gene
Aliases for FAUP1 Gene
- FAU Pseudogene 1 2 3 5
- FBR-MuSV-Associated Ubiquitously Expressed (Fox Derived) Pseudogene 1 2 3
- FAU, Ubiquitin Like And Ribosomal Protein S30 Fusion Pseudogene 1 2 3
- FAU1P 2 3
- Ubiquitin-Like Protein Fubi And Ribosomal Protein S30 Precursor Pseudogene 1 3
- FBR-MuSV-Associated Ubiquitously Expressed Gene Pseudogene 1 3
- Ubiquitin-Like-S30 Fusion Protein Pseudogene 1 3
- RPS30_2_1613 3
- FAUP1 5
External Ids for FAUP1 Gene
- HGNC: 17984
- NCBI Entrez Gene: 140623
- Ensembl: ENSG00000235297
Previous GeneCards Identifiers for FAUP1 Gene
- GC18U990073
- GC18M071842
- GC18M070206
- GC18M070208
- GC18M072058
Summaries for FAUP1 Gene
GeneCards Summary for FAUP1 Gene
FAUP1 (FAU Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FAUP1 Gene
Genomics for FAUP1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for FAUP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J074390 | Promoter | 0.3 | Ensembl | 250.7 | +0.2 | 155 | 0.4 | FAUP1 piR-37097-044 HSALNG0122433 C18orf63 DIPK1C | ||
| GH18J074494 | Promoter/Enhancer | 2.2 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 10.3 | -108.3 | -108260 | 8 | TBP ZBTB10 SP1 MXD4 NR2C1 MNT IKZF1 SMAD5 ETS1 IRF2 | CNDP2 HSALNG0122445 ZNF407 CNDP1 CYB5A FAUP1 HSALNG0122444 | |
| GH18J074540 | Enhancer | 1.4 | FANTOM5 Ensembl ENCODE dbSUPER | 10.3 | -152.1 | -152055 | 4 | MXD4 CEBPA HOMEZ KDM6A THAP11 FOXA2 ZNF511 SMAD4 SAP130 RXRA | TSHZ1 ZNF407 CNDP1 FAUP1 DIPK1C piR-51137-054 ENSG00000264340 | |
| GH18J074387 | Enhancer | 0.2 | ENCODE | 0.7 | +2.7 | 2735 | 0.2 | FAUP1 piR-37097-044 HSALNG0122433 C18orf63 DIPK1C | ||
| GH18J074384 | Enhancer | 0.2 | Ensembl | 0.4 | +6.2 | 6155 | 0.4 | piR-37097-044 FAUP1 HSALNG0122433 C18orf63 DIPK1C |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around FAUP1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for FAUP1 Gene
Latest Assembly
- chr18:74,389,830-74,390,356
- (GRCh38/hg38)
- Size:
- 527 bases
- Orientation:
- Minus strand
Previous Assembly
- chr18:72,057,065-72,057,591
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 527 bases
- Orientation:
- Minus strand
- chr18:72,057,119-72,057,532
- (GRCh37/hg19 by Ensembl)
- Size:
- 414 bases
- Orientation:
- Minus strand
Genomic View for FAUP1 Gene
Genes around FAUP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q22.3 by HGNC
- 18q22.3 by Entrez Gene
- 18q22.3 by Ensembl
FAUP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for FAUP1 Gene
Proteins for FAUP1 Gene
Post-translational modifications for FAUP1 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAUP1
- Origene Custom Protein Services for FAUP1
Assay products for research
No data available for DME Specific Peptides for FAUP1 Gene
Domains & Families for FAUP1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FAUP1 Gene
Function for FAUP1 Gene
Phenotypes From GWAS Catalog for FAUP1 Gene
Phenotypes for FAUP1 Gene
- GenomeRNAi human phenotypes for FAUP1:
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for FAUP1 - Starting at $85 >
- * FAUP1 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for FAUP1
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAUP1 Gene
Localization for FAUP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAUP1 Gene
Transcripts for FAUP1 Gene
mRNA/cDNA for FAUP1 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000474180 414 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for FAUP1 - Starting at $85 >
- * FAUP1 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for FAUP1
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for FAUP1 Gene
- GeneLoc Exon Structure for
- FAUP1
Expression for FAUP1 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAUP1 Gene
Orthologs for FAUP1 Gene
No data available for Orthologs for FAUP1 Gene
Paralogs for FAUP1 Gene
No data available for Paralogs for FAUP1 Gene
Variants for FAUP1 Gene
Additional Variant Information for FAUP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- FAUP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAUP1 Gene
Disorders for FAUP1 Gene
Additional Disease Information for FAUP1
No disorders were found for FAUP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAUP1 Gene
Publications for FAUP1 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- Characterization of a processed pseudogene of human FAU1 on chromosome 18. (PMID: 7642109) Kas K … Merregaert J (Gene 1995) 2 3
ExternalLinks
Products for FAUP1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAUP1
- Origene Custom Protein Services for FAUP1
- Browse OriGene Inhibitory RNA Products For FAUP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for FAUP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For FAUP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Recombinant Proteins
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for FAUP1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for FAUP1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for FAUP1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for FAUP1
Sources for FAUP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB