Aliases for FAUP1 Gene

Aliases for FAUP1 Gene

  • FAU Pseudogene 1 2 3 5
  • FBR-MuSV-Associated Ubiquitously Expressed (Fox Derived) Pseudogene 1 2 3
  • FAU, Ubiquitin Like And Ribosomal Protein S30 Fusion Pseudogene 1 2 3
  • FAU1P 2 3
  • Ubiquitin-Like Protein Fubi And Ribosomal Protein S30 Precursor Pseudogene 1 3
  • FBR-MuSV-Associated Ubiquitously Expressed Gene Pseudogene 1 3
  • Ubiquitin-Like-S30 Fusion Protein Pseudogene 1 3
  • RPS30_2_1613 3
  • FAUP1 5

External Ids for FAUP1 Gene

Previous GeneCards Identifiers for FAUP1 Gene

  • GC18U990073
  • GC18M071842
  • GC18M070206
  • GC18M070208
  • GC18M072058

Summaries for FAUP1 Gene

GeneCards Summary for FAUP1 Gene

FAUP1 (FAU Pseudogene 1) is a Pseudogene.

Additional gene information for FAUP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FAUP1 Gene

Genomics for FAUP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FAUP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J074390 Promoter 0.3 Ensembl 250.7 +0.2 155 0.4 FAUP1 piR-37097-044 HSALNG0122433 C18orf63 DIPK1C
GH18J074494 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.3 -108.3 -108260 8 TBP ZBTB10 SP1 MXD4 NR2C1 MNT IKZF1 SMAD5 ETS1 IRF2 CNDP2 HSALNG0122445 ZNF407 CNDP1 CYB5A FAUP1 HSALNG0122444
GH18J074540 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.3 -152.1 -152055 4 MXD4 CEBPA HOMEZ KDM6A THAP11 FOXA2 ZNF511 SMAD4 SAP130 RXRA TSHZ1 ZNF407 CNDP1 FAUP1 DIPK1C piR-51137-054 ENSG00000264340
GH18J074387 Enhancer 0.2 ENCODE 0.7 +2.7 2735 0.2 FAUP1 piR-37097-044 HSALNG0122433 C18orf63 DIPK1C
GH18J074384 Enhancer 0.2 Ensembl 0.4 +6.2 6155 0.4 piR-37097-044 FAUP1 HSALNG0122433 C18orf63 DIPK1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FAUP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FAUP1 Gene

Latest Assembly
chr18:74,389,830-74,390,356
(GRCh38/hg38)
Size:
527 bases
Orientation:
Minus strand

Previous Assembly
chr18:72,057,065-72,057,591
(GRCh37/hg19 by Entrez Gene)
Size:
527 bases
Orientation:
Minus strand

chr18:72,057,119-72,057,532
(GRCh37/hg19 by Ensembl)
Size:
414 bases
Orientation:
Minus strand

Genomic View for FAUP1 Gene

Genes around FAUP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAUP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAUP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAUP1 Gene

Proteins for FAUP1 Gene

Post-translational modifications for FAUP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAUP1 Gene

Domains & Families for FAUP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FAUP1 Gene

Function for FAUP1 Gene

Phenotypes From GWAS Catalog for FAUP1 Gene

genes like me logo Genes that share phenotypes with FAUP1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAUP1 Gene

Localization for FAUP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAUP1 Gene

Pathways & Interactions for FAUP1 Gene

PathCards logo

SuperPathways for FAUP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FAUP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FAUP1 Gene

Drugs & Compounds for FAUP1 Gene

No Compound Related Data Available

Transcripts for FAUP1 Gene

mRNA/cDNA for FAUP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAUP1 Gene

No ASD Table

Relevant External Links for FAUP1 Gene

GeneLoc Exon Structure for
FAUP1

Expression for FAUP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FAUP1 Gene

genes like me logo Genes that share expression patterns with FAUP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAUP1 Gene

Orthologs for FAUP1 Gene

Evolution for FAUP1 Gene

ENSEMBL:
Gene Tree for FAUP1 (if available)
TreeFam:
Gene Tree for FAUP1 (if available)

No data available for Orthologs for FAUP1 Gene

Paralogs for FAUP1 Gene

No data available for Paralogs for FAUP1 Gene

Variants for FAUP1 Gene

Additional Variant Information for FAUP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAUP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAUP1 Gene

Disorders for FAUP1 Gene

Additional Disease Information for FAUP1

No disorders were found for FAUP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAUP1 Gene

Publications for FAUP1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Characterization of a processed pseudogene of human FAU1 on chromosome 18. (PMID: 7642109) Kas K … Merregaert J (Gene 1995) 2 3

Products for FAUP1 Gene

Sources for FAUP1 Gene