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Aliases for FAM85B Gene

Subcategory (RNA class) for FAM85B Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM85B Gene

  • Family With Sequence Similarity 85 Member B 2 3 5
  • Family With Sequence Similarity 85, Member B 2

External Ids for FAM85B Gene

Previous GeneCards Identifiers for FAM85B Gene

  • GC08U900648
  • GC08M008025
  • GC08M008167

Summaries for FAM85B Gene

GeneCards Summary for FAM85B Gene

FAM85B (Family With Sequence Similarity 85 Member B) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FAM85B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM85B Gene

Genomics for FAM85B Gene

GeneHancer (GH) Regulatory Elements for FAM85B Gene

Promoters and enhancers for FAM85B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I008142 Enhancer 0.2 Ensembl 550.8 +0.9 941 1.6 FAM85B SNRPCP17 ENSG00000284606
GH08I008323 Enhancer 1.2 Ensembl ENCODE dbSUPER 7.1 -181.0 -181001 2 PKNOX1 BATF KLF5 IRF4 ZNF207 ATF7 RCOR1 ETV6 BCLAF1 IKZF2 FAM86B3P CLDN23 ALG1L13P FAM85B PRAG1
GH08I008933 Enhancer 0.7 ENCODE 9.9 -789.4 -789435 0.2 JUN CEBPG RFX5 ZEB1 HIC1 ZNF366 GLI2 SCRT2 FOSL2 FOS GC08M008934 MRPS18CP2 FAM90A11P FAM85B RNU6-682P
GH08I009108 Enhancer 1 ENCODE dbSUPER 5.6 -965.0 -965037 1.5 HDAC1 TEAD4 TAL1 ZKSCAN1 TCF12 GATA2 NCOR1 VEZF1 CBFA2T2 RCOR1 RNU7-55P ENSG00000254340 PPP1R3B ENSG00000253426 FAM86B3P RPL10P19 FAM85B ENSG00000197334 ERI1
GH08I008536 Enhancer 0.9 Ensembl ENCODE 5.2 -394.0 -393993 2.4 JUN RAD21 RFX5 POLR2A RCOR1 FOSL2 FOS TCF7L2 CEBPB EP300 PRAG1 FAM86B3P ENSG00000253343 FAM85B ENSG00000255459 ALG1L13P PIR34264 ENSG00000254153
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM85B on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM85B Gene

Genomic Locations for FAM85B Gene
chr8:8,101,125-8,143,741
(GRCh38/hg38)
Size:
42,617 bases
Orientation:
Minus strand
chr8:8,025,341-8,084,136
(GRCh37/hg19)

Genomic View for FAM85B Gene

Genes around FAM85B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM85B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM85B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM85B Gene

Proteins for FAM85B Gene

Post-translational modifications for FAM85B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM85B Gene

Domains & Families for FAM85B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM85B Gene

Function for FAM85B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM85B Gene

Localization for FAM85B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM85B Gene

Pathways & Interactions for FAM85B Gene

SuperPathways for FAM85B Gene

No Data Available

Interacting Proteins for FAM85B Gene

Gene Ontology (GO) - Biological Process for FAM85B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM85B Gene

Drugs & Compounds for FAM85B Gene

No Compound Related Data Available

Transcripts for FAM85B Gene

mRNA/cDNA for FAM85B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM85B Gene

No ASD Table

Relevant External Links for FAM85B Gene

GeneLoc Exon Structure for
FAM85B
ECgene alternative splicing isoforms for
FAM85B

Expression for FAM85B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM85B Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM85B Gene:

FAM85B
genes like me logo Genes that share expression patterns with FAM85B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM85B Gene

Orthologs for FAM85B Gene

Evolution for FAM85B Gene

ENSEMBL:
Gene Tree for FAM85B (if available)
TreeFam:
Gene Tree for FAM85B (if available)

No data available for Orthologs for FAM85B Gene

Paralogs for FAM85B Gene

No data available for Paralogs for FAM85B Gene

Variants for FAM85B Gene

Sequence variations from dbSNP and Humsavar for FAM85B Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000275980 -- 8,114,153(-) C/ intron_variant
rs1000627940 -- 8,112,986(-) G/C intron_variant
rs1000684086 -- 8,227,410(-) G/A genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant
rs1000796707 -- 8,176,757(-) A/C/G genic_upstream_transcript_variant, intron_variant
rs1000992378 -- 8,225,763(-) T/C genic_upstream_transcript_variant, intron_variant

Additional Variant Information for FAM85B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM85B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM85B Gene

Disorders for FAM85B Gene

Additional Disease Information for FAM85B

No disorders were found for FAM85B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM85B Gene

Publications for FAM85B Gene

No publications were found for FAM85B Gene.

Products for FAM85B Gene

Sources for FAM85B Gene

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