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Aliases for FAM24B-CUZD1 Gene

Subcategory (RNA class) for FAM24B-CUZD1 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for FAM24B-CUZD1 Gene

  • FAM24B-CUZD1 Readthrough 3

External Ids for FAM24B-CUZD1 Gene

Previous GeneCards Identifiers for FAM24B-CUZD1 Gene

  • GC10U901494
  • GC10M124591

Summaries for FAM24B-CUZD1 Gene

Entrez Gene Summary for FAM24B-CUZD1 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring FAM24B (family with sequence similarity 24, member B) and CUZD1 (CUB and zona pellucida-like domains 1) genes on chromosome 10. The read-transcript is a candidate for nonsense-mediated mRNA decay, and is thus unlikely to produce a protein product. [provided by RefSeq, Feb 2011]

GeneCards Summary for FAM24B-CUZD1 Gene

FAM24B-CUZD1 (FAM24B-CUZD1 Readthrough) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FAM24B-CUZD1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM24B-CUZD1 Gene

Genomics for FAM24B-CUZD1 Gene

GeneHancer (GH) Regulatory Elements for FAM24B-CUZD1 Gene

Promoters and enhancers for FAM24B-CUZD1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I122875 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 +1.6 1638 5.7 HDGF ARID4B SIN3A YY1 POLR2B ZNF207 ZNF143 SP3 JUNB MXD4 FAM24B FAM24B-CUZD1 LOC399815 BUB3 PIR46723 CUZD1 GC10M122775
GH10I122860 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +16.5 16460 5.1 HDAC1 PKNOX1 FOXA2 THRB RARA ZEB1 TCF12 ZNF366 RCOR1 FOS C10orf88 ACADSB CUZD1 FAM24B FAM24B-CUZD1 LOC399815 GC10M122775
GH10I122849 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +26.1 26094 7.7 MEIS2 JUN INSM2 ZIC2 ZNF335 ZFHX2 ZNF316 POLR2A SCRT2 NFE2 C10orf88 FAM24B LOC399815 ACADSB IKZF5 CUZD1 FAM24B-CUZD1 GC10M122775
GH10I122845 Promoter/Enhancer 1 EPDnew ENCODE 0.3 +33.3 33287 1.9 POLR2A GLIS1 ZNF143 BACH1 SIN3A CTBP2 ZIC2 CUZD1 ACADSB FAM24B LOC399815 C10orf88 IKZF5 ENSG00000272135 FAM24B-CUZD1 GC10M122775
GH10I122847 Enhancer 0.7 ENCODE dbSUPER 0.3 +31.2 31168 2.1 POLR2A SCRT2 CEBPB CBFA2T3 ACADSB FAM24B LOC399815 IKZF5 CUZD1 ENSG00000272135 FAM24B-CUZD1 GC10M122775
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM24B-CUZD1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM24B-CUZD1 Gene

Genomic Locations for FAM24B-CUZD1 Gene
chr10:122,832,155-122,879,641
(GRCh38/hg38)
Size:
47,487 bases
Orientation:
Minus strand
chr10:124,591,671-124,639,157
(GRCh37/hg19)

Genomic View for FAM24B-CUZD1 Gene

Genes around FAM24B-CUZD1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM24B-CUZD1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM24B-CUZD1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM24B-CUZD1 Gene

Proteins for FAM24B-CUZD1 Gene

Post-translational modifications for FAM24B-CUZD1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM24B-CUZD1 Gene

Domains & Families for FAM24B-CUZD1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM24B-CUZD1 Gene

Function for FAM24B-CUZD1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM24B-CUZD1 Gene

Localization for FAM24B-CUZD1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM24B-CUZD1 Gene

Pathways & Interactions for FAM24B-CUZD1 Gene

SuperPathways for FAM24B-CUZD1 Gene

No Data Available

Interacting Proteins for FAM24B-CUZD1 Gene

Gene Ontology (GO) - Biological Process for FAM24B-CUZD1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM24B-CUZD1 Gene

Drugs & Compounds for FAM24B-CUZD1 Gene

No Compound Related Data Available

Transcripts for FAM24B-CUZD1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for FAM24B-CUZD1 Gene

No ASD Table

Relevant External Links for FAM24B-CUZD1 Gene

GeneLoc Exon Structure for
FAM24B-CUZD1

No data available for mRNA/cDNA for FAM24B-CUZD1 Gene

Expression for FAM24B-CUZD1 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM24B-CUZD1 Gene

Orthologs for FAM24B-CUZD1 Gene

No data available for Orthologs and Evolution for FAM24B-CUZD1 Gene

Paralogs for FAM24B-CUZD1 Gene

No data available for Paralogs for FAM24B-CUZD1 Gene

Variants for FAM24B-CUZD1 Gene

Sequence variations from dbSNP and Humsavar for FAM24B-CUZD1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs11365591 benign, not specified 122,836,359(-) AAAAAAAAAAAAAAAA/AAAAAAAAAAA/AAAAAAAAAAAA/AAAAAAAAAAAAA/AAAAAAAAAAAAAA/AAAAAAAAAAAAAAA/AAAAAAAAAAAAAAAAA intron_variant
rs1000066202 -- 122,848,273(-) G/A intron_variant
rs1000095560 -- 122,848,592(-) C/G intron_variant
rs1000127218 -- 122,850,849(-) G/A/T intron_variant
rs1000154764 -- 122,870,367(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FAM24B-CUZD1 Gene

Variant ID Type Subtype PubMed ID
esv3624789 CNV gain 21293372
esv7958 CNV gain 19470904
nsv1054197 CNV loss 25217958
nsv1159779 CNV deletion 26073780
nsv832010 CNV gain 17160897
nsv975804 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FAM24B-CUZD1 Gene

Disorders for FAM24B-CUZD1 Gene

Additional Disease Information for FAM24B-CUZD1

No disorders were found for FAM24B-CUZD1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM24B-CUZD1 Gene

Publications for FAM24B-CUZD1 Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T … Taylor TD (PloS one 2010) 3 58
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark HF … Gray A (Genome research 2003) 3 58

Products for FAM24B-CUZD1 Gene

Sources for FAM24B-CUZD1 Gene

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