Aliases for FAM247B Gene

Aliases for FAM247B Gene

  • Family With Sequence Similarity 247 Member B 2 3
  • Novel Transcript 5
  • Lnc-GGTLC3-3 165
  • AC023490.6 5

External Ids for FAM247B Gene

Summaries for FAM247B Gene

GeneCards Summary for FAM247B Gene

FAM247B (Family With Sequence Similarity 247 Member B) is a Protein Coding gene.

Additional gene information for FAM247B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FAM247B Gene

Genomics for FAM247B Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FAM247B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J018512 Promoter 0.6 Ensembl 600.7 +0.2 186 0.4 ZFHX2 ZNF18 EGR2 FAM247B piR-39858-424 USP18
GH22J018510 Promoter 0.3 Ensembl 600.7 +1.3 1286 0.2 FAM247B piR-39858-424 USP18
GH22J018515 Enhancer 0.2 Ensembl 0.7 -3.8 -3771 0.7 piR-48049-050 GGTLC3 FAM247B
GH22J018385 Promoter 0.7 EPDnew Ensembl 0.1 +125.4 125386 1.6 FAM230J ENSG00000276874 FAM247B USP18
GH22J018149 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0 +361.9 361869 2.6 RNF2 GATAD2A REST POLR2A PRDM1 RBFOX2 RXRB NR2C1 IRF2 BRD4 HSALNG0133953 USP18 TUBA8 piR-58297-290 FAM247B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FAM247B on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FAM247B Gene

Genomic Locations for FAM247B Gene
chr22:18,501,794-18,512,187
(GRCh38/hg38)
Size:
10,394 bases
Orientation:
Minus strand

Genomic View for FAM247B Gene

Genes around FAM247B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM247B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM247B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for FAM247B Gene

Proteins for FAM247B Gene

Post-translational modifications for FAM247B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM247B Gene

Domains & Families for FAM247B Gene

Gene Families for FAM247B Gene

genes like me logo Genes that share domains with FAM247B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FAM247B Gene

Function for FAM247B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM247B Gene

Localization for FAM247B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM247B Gene

Pathways & Interactions for FAM247B Gene

PathCards logo

SuperPathways for FAM247B Gene

No Data Available

Interacting Proteins for FAM247B Gene

Gene Ontology (GO) - Biological Process for FAM247B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM247B Gene

Drugs & Compounds for FAM247B Gene

No Compound Related Data Available

Transcripts for FAM247B Gene

mRNA/cDNA for FAM247B Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 RNACentral transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM247B Gene

No ASD Table

Relevant External Links for FAM247B Gene

GeneLoc Exon Structure for
FAM247B

Expression for FAM247B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM247B Gene

Orthologs for FAM247B Gene

Evolution for FAM247B Gene

ENSEMBL:
Gene Tree for FAM247B (if available)
TreeFam:
Gene Tree for FAM247B (if available)

No data available for Orthologs for FAM247B Gene

Paralogs for FAM247B Gene

No data available for Paralogs for FAM247B Gene

Variants for FAM247B Gene

Additional Variant Information for FAM247B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM247B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM247B Gene

Disorders for FAM247B Gene

Additional Disease Information for FAM247B

No disorders were found for FAM247B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM247B Gene

Publications for FAM247B Gene

  1. Formation of human long intergenic non-coding RNA genes, pseudogenes, and protein genes: Ancestral sequences are key players. (PMID: 32214344) Delihas N (PloS one 2020) 2 3

No data available for Mastermind for FAM247B Gene

Products for FAM247B Gene

Sources for FAM247B Gene